RNA–Protein interactions for RNA: ENST00000392903.3

SHTN1-204, Transcript of shootin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SHTN1, Length 2,400 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHTN1-204ENST00000392903 DNAJC7Q99615 494 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 COA1Q9GZY4 146 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 VPS16Q9H269 839 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 USP40Q9NVE5 1235 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 G3V3G9 751 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 DCAF8Q5TAQ9 597 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 CCDC70Q6NSX1 233 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 DPP8Q6V1X1 898 aaPredicted RBP16.67■□□□□ 0.26
SHTN1-204ENST00000392903 OR8K1Q8NGG5 319 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 KCNQ5Q9NR82 932 aa16.67■□□□□ 0.26
SHTN1-204ENST00000392903 TCP11X2Q5H9J9 407 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 COA7Q96BR5 231 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 C6orf50Q9HD87 102 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 TMEM260Q9NX78 707 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 MTMR4Q9NYA4 1195 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 RWDD2AQ9UIY3 292 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 CAPN7Q9Y6W3 813 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 BRWD3Q6RI45 1802 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 PDE2AO00408 941 aaPredicted RBP16.66■□□□□ 0.26
SHTN1-204ENST00000392903 PDHBP11177 359 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 KRT83P78385 493 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 SOGA3Q5TF21 947 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 CAGE1Q8TC20 777 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 PYM1Q9BRP8 204 aaKnown RBP16.66■□□□□ 0.26
SHTN1-204ENST00000392903 GPCPD1Q9NPB8 672 aa16.66■□□□□ 0.26
SHTN1-204ENST00000392903 KRT86O43790 486 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 PRCPP42785 496 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 ATP2B2Q01814 1243 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 NONOQ15233 471 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHTN1-204ENST00000392903 ZNF658Q5TYW1 1059 aaPredicted RBP16.65■□□□□ 0.26
SHTN1-204ENST00000392903 MSL1Q68DK7 614 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 MMGT1Q8N4V1 131 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 LRRC15Q8TF66 581 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 NELFBQ8WX92 580 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 PAGR1Q9BTK6 254 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 TAB2Q9NYJ8 693 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 SUFUQ9UMX1 484 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 TTC26A0AVF1 554 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 KCNJ18B7U540 433 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 MEFVO15553 781 aaPredicted RBP16.65■□□□□ 0.26
SHTN1-204ENST00000392903 ZEB2O60315 1214 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 KIAA0754O94854 1291 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 GNA11P29992 359 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 ITIH3Q06033 890 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 PAK1Q13153 545 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 KCNJ12Q14500 433 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 SND1Q7KZF4 910 aaKnown RBP eCLIP16.65■□□□□ 0.26
SHTN1-204ENST00000392903 YTHDF3Q7Z739 585 aaKnown RBP16.65■□□□□ 0.26
SHTN1-204ENST00000392903 NLGN1Q8N2Q7 840 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 TBCKQ8TEA7 893 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 SAMM50Q9Y512 469 aa16.65■□□□□ 0.26
SHTN1-204ENST00000392903 NDUFAB1O14561 156 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 TECP42680 631 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 ALS2CLQ60I27 953 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 ZNF572Q7Z3I7 529 aaPredicted RBP16.64■□□□□ 0.25
SHTN1-204ENST00000392903 OTUD6BQ8N6M0 293 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 DBNDD1Q9H9R9 158 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 ZNF219Q9P2Y4 722 aaPredicted RBP16.64■□□□□ 0.25
SHTN1-204ENST00000392903 SERPINB13Q9UIV8 391 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 LUC7L2Q9Y383 392 aaKnown RBP16.64■□□□□ 0.25
SHTN1-204ENST00000392903 TRIM49BA6NDI0 452 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 MPHOSPH10O00566 681 aaKnown RBP16.64■□□□□ 0.25
SHTN1-204ENST00000392903 C21orf2O43822 256 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 MMP10P09238 476 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 CACNB3P54284 484 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 UBXN1Q04323 297 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 GABPAQ06546 454 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 WDR59Q6PJI9 974 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 KRT25Q7Z3Z0 450 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 TMC4Q7Z404 712 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 ZNF622Q969S3 477 aaKnown RBP eCLIP16.64■□□□□ 0.257e-7■■■□□ 17.3
SHTN1-204ENST00000392903 RABEP2Q9H5N1 569 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 PCDHAC2Q9Y5I4 1007 aa16.64■□□□□ 0.25
SHTN1-204ENST00000392903 ANKRD31Q8N7Z5 1873 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 ZNF185O15231 689 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 NPR1P16066 1061 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 NFIAQ12857 509 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 CDC42EP5Q6NZY7 148 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 AEBP2Q6ZN18 517 aaPredicted RBP16.63■□□□□ 0.25
SHTN1-204ENST00000392903 NEK8Q86SG6 692 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 REXO1Q8N1G1 1221 aaKnown RBP16.63■□□□□ 0.25
SHTN1-204ENST00000392903 EEF2KMTQ96G04 330 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 PURBQ96QR8 312 aaKnown RBP16.63■□□□□ 0.25
SHTN1-204ENST00000392903 RMND1Q9NWS8 449 aa16.63■□□□□ 0.25
SHTN1-204ENST00000392903 A0A1W2PQC6 194 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 H0YHG0 523 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 RAD21O60216 631 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 OR52Z1P0C646 297 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 C2orf54Q08AI8 447 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 MEA1Q16626 185 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 TTMPQ5BVD1 217 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 KIAA1328Q86T90 577 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 ZFPM1Q8IX07 1006 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 JPH2Q9BR39 696 aaPredicted RBP16.62■□□□□ 0.25
SHTN1-204ENST00000392903 RIOX1Q9H6W3 641 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 CAPN11Q9UMQ6 739 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 LTBP1Q14766 1721 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 MYO1FO00160 1098 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 APBA3O96018 575 aa16.62■□□□□ 0.25
SHTN1-204ENST00000392903 PLCG1P19174 1290 aa16.62■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 38.4 ms