RNA–Protein interactions for RNA: ENST00000392343.3

CCDC57-203, Transcript of coiled-coil domain containing 57, humanhuman

APPRIS P2 TSL 1 (best) BASIC

Gene CCDC57, Length 2,896 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC57-203ENST00000392343 BAP1Q92560 729 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 GJA10Q969M2 543 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 NOX5Q96PH1 765 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.46■□□□□ 0.07
CCDC57-203ENST00000392343 GOLPH3Q9H4A6 298 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 CCDC87Q9NVE4 849 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 BARHL2Q9NY43 387 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 TBC1D7Q9P0N9 293 aa15.46■□□□□ 0.07
CCDC57-203ENST00000392343 PCP11498 1178 aaKnown RBP15.46■□□□□ 0.06
CCDC57-203ENST00000392343 PRLRP16471 622 aa15.46■□□□□ 0.06
CCDC57-203ENST00000392343 CFAP221Q4G0U5 840 aa15.46■□□□□ 0.06
CCDC57-203ENST00000392343 CENPPQ6IPU0 288 aa15.46■□□□□ 0.06
CCDC57-203ENST00000392343 AEBP2Q6ZN18 517 aaPredicted RBP15.46■□□□□ 0.06
CCDC57-203ENST00000392343 SAP30BPQ9UHR5 308 aaKnown RBP15.46■□□□□ 0.06
CCDC57-203ENST00000392343 SMCO2A6NFE2 343 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 TSPY3P0CV98 308 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 TSPY8P0CW00 308 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 HNRNPH3P31942 346 aaKnown RBP15.45■□□□□ 0.06
CCDC57-203ENST00000392343 LSP1P33241 339 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 UBE4AQ14139 1066 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 TMED8Q6PL24 325 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-203ENST00000392343 MAATS1Q7Z4T9 603 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 TXNRD3Q86VQ6 643 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 IFT20Q8IY31 132 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 OR2W6PQ8NHA6 318 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 CASKIN2Q8WXE0 1202 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 PACSIN1Q9BY11 444 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 SH3GLB2Q9NR46 395 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 KLRF2D3W0D1 207 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 KCNQ4P56696 695 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 MAN2A1Q16706 1144 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 USP17L2Q6R6M4 530 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 SV2BQ7L1I2 683 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 ZNF572Q7Z3I7 529 aaPredicted RBP15.45■□□□□ 0.06
CCDC57-203ENST00000392343 SUGP1Q8IWZ8 645 aaKnown RBP15.45■□□□□ 0.06
CCDC57-203ENST00000392343 TBCKQ8TEA7 893 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 PIK3R5Q8WYR1 880 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 CAVIN3Q969G5 261 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 NUDT12Q9BQG2 462 aa15.45■□□□□ 0.06
CCDC57-203ENST00000392343 POTEMA6NI47 508 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 BACH1O14867 736 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 KIAA0754O94854 1291 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 KLRC1P26715 233 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 SKOR1P84550 965 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 KCNMA1Q12791 1236 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 IQCKQ8N0W5 287 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 CALML4Q96GE6 196 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 PPANQ9NQ55 473 aaKnown RBP15.44■□□□□ 0.06
CCDC57-203ENST00000392343 ATP8A2Q9NTI2 1148 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 ARPP21Q9UBL0 812 aaPredicted RBP15.44■□□□□ 0.06
CCDC57-203ENST00000392343 STRCP1A6NGW2 1772 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 EPB41P11171 864 aaKnown RBP15.44■□□□□ 0.06
CCDC57-203ENST00000392343 AMPD3Q01432 767 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 GRB10Q13322 594 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 GRM4Q14833 912 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 NONOQ15233 471 aaKnown RBP eCLIP15.44■□□□□ 0.06
CCDC57-203ENST00000392343 HGSNATQ68CP4 663 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 PDXDC1Q6P996 788 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 TBC1D5Q92609 795 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 UBA5Q9GZZ9 404 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 BLOC1S4Q9NUP1 217 aa15.44■□□□□ 0.06
CCDC57-203ENST00000392343 TLR2O60603 784 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 NR1D1P20393 614 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 HSPA2P54652 639 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 POLR2FP61218 127 aaKnown RBP15.43■□□□□ 0.06
CCDC57-203ENST00000392343 HDLBPQ00341 1268 aaKnown RBP15.43■□□□□ 0.06
CCDC57-203ENST00000392343 ITIH3Q06033 890 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 PARP10Q53GL7 1025 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 NAA35Q5VZE5 725 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 DDX42Q86XP3 938 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC57-203ENST00000392343 TMEM47Q9BQJ4 181 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 NHSL1Q5SYE7 1610 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 A0A1B0GUL6 1792 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 LCA5LO95447 670 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 HLTFQ14527 1009 aaKnown RBP eCLIP15.43■□□□□ 0.06
CCDC57-203ENST00000392343 ASTE1Q2TB18 679 aaPredicted RBP15.43■□□□□ 0.06
CCDC57-203ENST00000392343 CEP85LQ5SZL2 805 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 KCNK18Q7Z418 384 aa15.43■□□□□ 0.06
CCDC57-203ENST00000392343 PRPHP41219 470 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 IFT88Q13099 833 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 ITPK1Q13572 414 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 DIXDC1Q155Q3 683 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 NEK8Q86SG6 692 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 CCDC84Q86UT8 332 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 DGKHQ86XP1 1220 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 DZIP1Q86YF9 867 aaKnown RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 SH3RF3Q8TEJ3 882 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 CDK5RAP3Q96JB5 506 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 BCCIPQ9P287 314 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 ADAMTS1Q9UHI8 967 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 E7EVH7 732 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 MEFVO15553 781 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 RAD51CO43502 376 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 SSBP05455 408 aaKnown RBP eCLIP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 HIBADHP31937 336 aaKnown RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 CACNB1Q02641 598 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 NELFCDQ8IXH7 590 aa15.42■□□□□ 0.06
CCDC57-203ENST00000392343 ZNF444Q8N0Y2 327 aaPredicted RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 ZNF473Q8WTR7 871 aaKnown RBP15.42■□□□□ 0.06
CCDC57-203ENST00000392343 PNMA5Q96PV4 448 aa15.42■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 9.2 ms