RNA–Protein interactions for RNA: ENST00000392090.6

PDCD2-202, Transcript of programmed cell death 2, humanhuman

TSL 1 (best) BASIC

Gene PDCD2, Length 936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD2-202ENST00000392090 BRPF3Q9ULD4 1205 aa22.59■■□□□ 1.21
PDCD2-202ENST00000392090 MRVI1Q9Y6F6 885 aa22.59■■□□□ 1.21
PDCD2-202ENST00000392090 KLF18A0A0U1RQI7 1052 aa22.58■■□□□ 1.21
PDCD2-202ENST00000392090 hCG_1642624A0A1W2PR95 340 aa22.58■■□□□ 1.21
PDCD2-202ENST00000392090 A6NJR5 290 aa22.58■■□□□ 1.21
PDCD2-202ENST00000392090 KPNA6O60684 536 aa22.58■■□□□ 1.21
PDCD2-202ENST00000392090 PURAQ00577 322 aaKnown RBP22.58■■□□□ 1.21
PDCD2-202ENST00000392090 VSIG10LQ86VR7 867 aa22.58■■□□□ 1.21
PDCD2-202ENST00000392090 FAM126BQ8IXS8 530 aa22.58■■□□□ 1.21
PDCD2-202ENST00000392090 MTG1Q9BT17 334 aaPredicted RBP22.58■■□□□ 1.21
PDCD2-202ENST00000392090 ITGB8P26012 769 aa22.57■■□□□ 1.2
PDCD2-202ENST00000392090 PSMA5P28066 241 aa22.57■■□□□ 1.2
PDCD2-202ENST00000392090 SLC43A3Q8NBI5 491 aa22.57■■□□□ 1.2
PDCD2-202ENST00000392090 IL31RAQ8NI17 732 aa22.57■■□□□ 1.2
PDCD2-202ENST00000392090 TBX21Q9UL17 535 aa22.57■■□□□ 1.2
PDCD2-202ENST00000392090 GRIN2DO15399 1336 aa22.57■■□□□ 1.2
PDCD2-202ENST00000392090 GOLGA8AA7E2F4 631 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 GOLGA8BA8MQT2 603 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 TIMP1P01033 207 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 KCNV1Q6PIU1 500 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 Q6ZUG5 572 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 HEATR3Q7Z4Q2 680 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 AFG1LQ8WV93 481 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 PSTPIP2Q9H939 334 aa22.56■■□□□ 1.2
PDCD2-202ENST00000392090 DDX41Q9UJV9 622 aaKnown RBP22.56■■□□□ 1.2
PDCD2-202ENST00000392090 SOX1O00570 391 aaPredicted RBP22.55■■□□□ 1.2
PDCD2-202ENST00000392090 EPB41L2O43491 1005 aaKnown RBP22.55■■□□□ 1.2
PDCD2-202ENST00000392090 CASTP20810 708 aaKnown RBP22.55■■□□□ 1.2
PDCD2-202ENST00000392090 FPGSQ05932 587 aa22.55■■□□□ 1.2
PDCD2-202ENST00000392090 ARHGAP1Q07960 439 aa22.55■■□□□ 1.2
PDCD2-202ENST00000392090 LRIT3Q3SXY7 679 aa22.55■■□□□ 1.2
PDCD2-202ENST00000392090 USP17L6PQ6QN14 398 aa22.55■■□□□ 1.2
PDCD2-202ENST00000392090 LRCH3Q96II8 777 aa22.55■■□□□ 1.2
PDCD2-202ENST00000392090 LAMA2P24043 3122 aaKnown RBP22.55■■□□□ 1.2
PDCD2-202ENST00000392090 PIK3CDO00329 1044 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 CD4P01730 458 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 RPS6KB1P23443 525 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 CHMP4BP1P59074 171 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 APOBRQ0VD83 1088 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 LAMC2Q13753 1193 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 FAM47CQ5HY64 1035 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 DHX37Q8IY37 1157 aaKnown RBP22.54■■□□□ 1.2
PDCD2-202ENST00000392090 BRF1Q92994 677 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 ZFP91Q96JP5 570 aaPredicted RBP22.54■■□□□ 1.2
PDCD2-202ENST00000392090 TRPV6Q9H1D0 765 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 CNTNAP5Q8WYK1 1306 aa22.54■■□□□ 1.2
PDCD2-202ENST00000392090 MEIS2O14770 477 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 RGS20O76081 388 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 METAP2P50579 478 aaKnown RBP eCLIP22.53■■□□□ 1.2
PDCD2-202ENST00000392090 RCAN1P53805 252 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 SHHQ15465 462 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 GNPTABQ3T906 1256 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 GPKOWQ92917 476 aaPredicted RBP eCLIP22.53■■□□□ 1.21e-6■□□□□ 11.3
PDCD2-202ENST00000392090 PPP1R12CQ9BZL4 782 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 ALDH8A1Q9H2A2 487 aaPredicted RBP22.53■■□□□ 1.2
PDCD2-202ENST00000392090 V9GY48 417 aaPredicted RBP22.53■■□□□ 1.2
PDCD2-202ENST00000392090 MYH7BA7E2Y1 1941 aa22.53■■□□□ 1.2
PDCD2-202ENST00000392090 CCDC196A0A1B0GTZ2 297 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 B4GALT4O60513 344 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 STAM2O75886 525 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 MMP3P08254 477 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 TGFB3P10600 412 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 DGKDQ16760 1214 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 NBPF20Q3BBV1 942 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 C9orf50Q5SZB4 431 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 MFSD5Q6N075 450 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 EMID1Q96A84 441 aaPredicted RBP22.52■■□□□ 1.2
PDCD2-202ENST00000392090 USP26Q9BXU7 913 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 FRMPD4Q14CM0 1322 aa22.52■■□□□ 1.2
PDCD2-202ENST00000392090 SCN10AQ9Y5Y9 1956 aa22.51■■□□□ 1.19
PDCD2-202ENST00000392090 SORBS3O60504 671 aa22.51■■□□□ 1.19
PDCD2-202ENST00000392090 SUPT20HL2P0C7V6 817 aa22.51■■□□□ 1.19
PDCD2-202ENST00000392090 TMEM199Q8N511 208 aa22.51■■□□□ 1.19
PDCD2-202ENST00000392090 PPTC7Q8NI37 304 aa22.51■■□□□ 1.19
PDCD2-202ENST00000392090 HIPK3Q9H422 1215 aa22.51■■□□□ 1.19
PDCD2-202ENST00000392090 SPDYE3A6NKU9 549 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 GGPS1O95749 300 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 CDC27P30260 824 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 CYP2C18P33260 490 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 NAPAP54920 295 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 MRPS9P82933 396 aaKnown RBP22.5■■□□□ 1.19
PDCD2-202ENST00000392090 FUT2Q10981 343 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 UBE2SQ16763 222 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 CELF3Q5SZQ8 465 aaKnown RBP22.5■■□□□ 1.19
PDCD2-202ENST00000392090 WWC2Q6AWC2 1192 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 XRRA1Q6P2D8 792 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 NFRKBQ6P4R8 1299 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 MLXIPQ9HAP2 919 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 FAM217BQ9NTX9 383 aaPredicted RBP22.5■■□□□ 1.19
PDCD2-202ENST00000392090 TRMT13Q9NUP7 481 aaKnown RBP22.5■■□□□ 1.19
PDCD2-202ENST00000392090 RTEL1Q9NZ71 1219 aa22.5■■□□□ 1.19
PDCD2-202ENST00000392090 UBA1P22314 1058 aaKnown RBP22.49■■□□□ 1.19
PDCD2-202ENST00000392090 ADD1P35611 737 aaKnown RBP22.49■■□□□ 1.19
PDCD2-202ENST00000392090 EPHB4P54760 987 aa22.49■■□□□ 1.19
PDCD2-202ENST00000392090 PPIGQ13427 754 aaKnown RBP eCLIP22.49■■□□□ 1.19
PDCD2-202ENST00000392090 MYSM1Q5VVJ2 828 aa22.49■■□□□ 1.19
PDCD2-202ENST00000392090 PCNX4Q63HM2 1172 aa22.49■■□□□ 1.19
PDCD2-202ENST00000392090 RUFY3Q7L099 469 aa22.49■■□□□ 1.19
PDCD2-202ENST00000392090 FBXL16Q8N461 479 aa22.49■■□□□ 1.19
PDCD2-202ENST00000392090 PPP1R13LQ8WUF5 828 aa22.49■■□□□ 1.19
Retrieved 100 of 20,778 RNA–protein pairs in 18.2 ms