RNA–Protein interactions for RNA: ENST00000392000.4

LRRFIP1-204, Transcript of LRR binding FLII interacting protein 1, humanhuman

TSL 1 (best) BASIC

Gene LRRFIP1, Length 3,365 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LRRFIP1-204ENST00000392000 GPCPD1Q9NPB8 672 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 ANAPC4Q9UJX5 808 aa16.08■□□□□ 0.17
LRRFIP1-204ENST00000392000 MYH13Q9UKX3 1938 aa16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 EIF3HO15372 352 aaKnown RBP eCLIP16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 RDXP35241 583 aaKnown RBP16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 C4orf32Q8N8J7 132 aa16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 PIGSQ96S52 555 aa16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 DPH5Q9H2P9 285 aa16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 PKD1L3Q7Z443 1732 aa16.08■□□□□ 0.16
LRRFIP1-204ENST00000392000 GOLGA6L7A0A1B0GV03 622 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 RASSF10A6NK89 507 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 POTEDQ86YR6 584 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 ZNF507Q8TCN5 953 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 TMEM47Q9BQJ4 181 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 PACSIN1Q9BY11 444 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 TRIM9Q9C026 710 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 ZNF652Q9Y2D9 606 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 AMOTL1Q8IY63 956 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 FAM133AQ8N9E0 248 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 TAF4BQ92750 862 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 NOX5Q96PH1 765 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 BSDC1Q9NW68 430 aaPredicted RBP16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 SPEF2Q9C093 1822 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 PDS5AQ29RF7 1337 aaKnown RBP16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 KLRC4O43908 158 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 LRRC47Q8N1G4 583 aaKnown RBP16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 TBCKQ8TEA7 893 aa16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 DDX52Q9Y2R4 599 aaKnown RBP eCLIP16.07■□□□□ 0.16
LRRFIP1-204ENST00000392000 COL4A1P02462 1669 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 BICDL2A1A5D9 508 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 LDHBP07195 334 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 HDLBPQ00341 1268 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 PPP2R5BQ15173 497 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 HAUS3Q68CZ6 603 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 FAM212AQ96EL1 285 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 CCDC114Q96M63 670 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 SETDB2Q96T68 719 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 LSM14BQ9BX40 385 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 THAP9Q9H5L6 903 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 EPB41L3Q9Y2J2 1087 aaPredicted RBP16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 GUCY2CP25092 1073 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 NFIXQ14938 502 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 FAM98CQ17RN3 349 aaKnown RBP16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 SV2BQ7L1I2 683 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 FAM114A1Q8IWE2 563 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 SEMA6BQ9H3T3 888 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 EPHB4P54760 987 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 CFAP221Q4G0U5 840 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 LINC00116Q8NCU8 138 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 GIMAP8Q8ND71 665 aaPredicted RBP16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 SNX29Q8TEQ0 813 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 NUDT12Q9BQG2 462 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 SH2D4AQ9H788 454 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 MAD2L2Q9UI95 211 aa16.06■□□□□ 0.16
LRRFIP1-204ENST00000392000 LAMB4A4D0S4 1761 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 GNPATO15228 680 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 OR52Z1P0C646 297 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 TAX1BP1Q86VP1 789 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 NUP58Q9BVL2 599 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 VIPAS39Q9H9C1 493 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 BCS1LQ9Y276 419 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 ZNF804BA4D1E1 1349 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 NR1D1P20393 614 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 CDR1P51861 262 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 UBE2SQ16763 222 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 RPGRIP1Q96KN7 1286 aa16.05■□□□□ 0.16
LRRFIP1-204ENST00000392000 TDP2O95551 362 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 KLRC1P26715 233 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 MAP2K2P36507 400 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 AARSP49588 968 aaKnown RBP eCLIP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 SF3B2Q13435 895 aaKnown RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 VWA3BQ502W6 1294 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 MCTP2Q6DN12 878 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 IFT20Q8IY31 132 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 KIAA0895Q8NCT3 520 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 DDX47Q9H0S4 455 aaKnown RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 SEC63Q9UGP8 760 aaKnown RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 PLAAQ9Y263 795 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 TCP1P17987 556 aaKnown RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 COPB2P35606 906 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 SLC16A2P36021 539 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 DCAF17Q5H9S7 520 aaPredicted RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 AENQ8WTP8 325 aaKnown RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 SPAG5Q96R06 1193 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 ADAMTSL3P82987 1691 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 USP17L5A8MUK1 530 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 IFFO1Q0D2I5 559 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 TLR10Q9BXR5 811 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 MYH6P13533 1939 aa16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 ZC3H4Q9UPT8 1303 aaKnown RBP16.04■□□□□ 0.16
LRRFIP1-204ENST00000392000 NPHP3-ACAD11A0A0J9YXS1 232 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 A0A1W2PQC6 194 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 GOLGA8KD6RF30 607 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 RPSAP08865 295 aaKnown RBP16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 FBXO33Q7Z6M2 555 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 CCDC170Q8IYT3 715 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 PYM1Q9BRP8 204 aaKnown RBP16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 ATP8A2Q9NTI2 1148 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 GGT7Q9UJ14 662 aa16.03■□□□□ 0.16
LRRFIP1-204ENST00000392000 MYMKA6NI61 221 aa16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms