RNA–Protein interactions for RNA: ENST00000390687.8

SNRPN-202, Transcript of small nuclear ribonucleoprotein polypeptide N, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SNRPN, Length 1,528 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRPN-202ENST00000390687 POLR3EQ9NVU0 708 aa17.2■□□□□ 0.34
SNRPN-202ENST00000390687 TBX21Q9UL17 535 aa17.2■□□□□ 0.34
SNRPN-202ENST00000390687 LTBP2Q14767 1821 aa17.2■□□□□ 0.34
SNRPN-202ENST00000390687 KIAA1217Q5T5P2 1943 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 MEIS2O14770 477 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 MYL3P08590 195 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 ARHGAP1Q07960 439 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 FUT2Q10981 343 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 LRIT3Q3SXY7 679 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 USP17L6PQ6QN14 398 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 Q6ZUG5 572 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 USP26Q9BXU7 913 aa17.19■□□□□ 0.34
SNRPN-202ENST00000390687 FAM217BQ9NTX9 383 aaPredicted RBP17.19■□□□□ 0.34
SNRPN-202ENST00000390687 RBM28Q9NW13 759 aaKnown RBP17.19■□□□□ 0.34
SNRPN-202ENST00000390687 KLF18A0A0U1RQI7 1052 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 PIK3CDO00329 1044 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 EPB41L2O43491 1005 aaKnown RBP17.18■□□□□ 0.34
SNRPN-202ENST00000390687 TIMP1P01033 207 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 GH1P01241 217 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 RTN1Q16799 776 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 BRDTQ58F21 947 aaPredicted RBP17.18■□□□□ 0.34
SNRPN-202ENST00000390687 BLOC1S2Q6QNY1 142 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 AFG1LQ8WV93 481 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 LRCH3Q96II8 777 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 MTG1Q9BT17 334 aaPredicted RBP17.18■□□□□ 0.34
SNRPN-202ENST00000390687 MRVI1Q9Y6F6 885 aa17.18■□□□□ 0.34
SNRPN-202ENST00000390687 KPNA6O60684 536 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 RPS6KB1P23443 525 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 CDC27P30260 824 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 FGD1P98174 961 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 APOBRQ0VD83 1088 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 SHHQ15465 462 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 FBXL16Q8N461 479 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 SEZ6LQ9BYH1 1024 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 TRPV6Q9H1D0 765 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 PSTPIP2Q9H939 334 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 FRMPD4Q14CM0 1322 aa17.17■□□□□ 0.34
SNRPN-202ENST00000390687 TLR3O15455 904 aaKnown RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 PSMA5P28066 241 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 CCND2P30279 289 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 EPHB4P54760 987 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 MRPS9P82933 396 aaKnown RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 SP2Q02086 613 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 C9orf50Q5SZB4 431 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 SMARCC2Q8TAQ2 1214 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 BRF1Q92994 677 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 V9GY48 417 aaPredicted RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 CNTNAP5Q8WYK1 1306 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 GOLGA8AA7E2F4 631 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 GOLGA8BA8MQT2 603 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 MMP3P08254 477 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 CASTP20810 708 aaKnown RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 ADD1P35611 737 aaKnown RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 RCAN1P53805 252 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 LAMC2Q13753 1193 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 NBPF20Q3BBV1 942 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 KCNV1Q6PIU1 500 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 HEATR3Q7Z4Q2 680 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 GPKOWQ92917 476 aaPredicted RBP eCLIP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 CUL5Q93034 780 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 EMID1Q96A84 441 aaPredicted RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 AGXT2Q9BYV1 514 aa17.16■□□□□ 0.34
SNRPN-202ENST00000390687 ALDH8A1Q9H2A2 487 aaPredicted RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 NAP1L2Q9ULW6 460 aaPredicted RBP17.16■□□□□ 0.34
SNRPN-202ENST00000390687 COL6A3P12111 3177 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 B4GALT4O60513 344 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 TGFB3P10600 412 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 MYSM1Q5VVJ2 828 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 MFSD5Q6N075 450 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 DHX37Q8IY37 1157 aaKnown RBP17.15■□□□□ 0.34
SNRPN-202ENST00000390687 PPP1R13LQ8WUF5 828 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 ZSWIM6Q9HCJ5 1215 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 RTEL1Q9NZ71 1219 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 CDH23Q9H251 3354 aa17.15■□□□□ 0.34
SNRPN-202ENST00000390687 SCN10AQ9Y5Y9 1956 aa17.14■□□□□ 0.33
SNRPN-202ENST00000390687 FPGSQ05932 587 aa17.14■□□□□ 0.33
SNRPN-202ENST00000390687 CELF3Q5SZQ8 465 aaKnown RBP17.14■□□□□ 0.33
SNRPN-202ENST00000390687 WWC2Q6AWC2 1192 aa17.14■□□□□ 0.33
SNRPN-202ENST00000390687 TYW1BQ6NUM6 668 aa17.14■□□□□ 0.33
SNRPN-202ENST00000390687 BCAS3Q9H6U6 928 aa17.14■□□□□ 0.33
SNRPN-202ENST00000390687 TRMT13Q9NUP7 481 aaKnown RBP17.14■□□□□ 0.33
SNRPN-202ENST00000390687 MYH7BA7E2Y1 1941 aa17.14■□□□□ 0.33
SNRPN-202ENST00000390687 STAM2O75886 525 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 METAP2P50579 478 aaKnown RBP eCLIP17.13■□□□□ 0.33
SNRPN-202ENST00000390687 DGKDQ16760 1214 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 UBE2SQ16763 222 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 NFRKBQ6P4R8 1299 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 RUFY3Q7L099 469 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 PPTC7Q8NI37 304 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 KAT2BQ92831 832 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 INPP4AQ96PE3 977 aaPredicted RBP17.13■□□□□ 0.33
SNRPN-202ENST00000390687 PPP1R12CQ9BZL4 782 aa17.13■□□□□ 0.33
SNRPN-202ENST00000390687 SPATA31C2B4DYI2 1134 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 SORBS3O60504 671 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 GGPS1O95749 300 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 UBA1P22314 1058 aaKnown RBP17.12■□□□□ 0.33
SNRPN-202ENST00000390687 ICAM3P32942 547 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 CYP2C18P33260 490 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 EVCP57679 992 aa17.12■□□□□ 0.33
SNRPN-202ENST00000390687 HSDL1Q3SXM5 330 aa17.12■□□□□ 0.33
Retrieved 100 of 20,778 RNA–protein pairs in 73.3 ms