RNA–Protein interactions for RNA: ENST00000390627.3

IGHV3-53-201, Transcript of immunoglobulin heavy variable 3-53, humanhuman

APPRIS P1 BASIC

Gene IGHV3-53, Length 571 nt, Biotype IG V gene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-53-201ENST00000390627 VPS54Q9P1Q0 977 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 PCDHA6Q9UN73 950 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 GNEQ9Y223 722 aaKnown RBP17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 Q9Y3F1 56 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 PCDHA8Q9Y5H6 950 aa17.24■□□□□ 0.35
IGHV3-53-201ENST00000390627 ADAMTS4O75173 837 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 SMPD1P17405 629 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 XBP1P17861 261 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 MNX1P50219 401 aaPredicted RBP17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 GJA9P57773 515 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 DUSP28Q4G0W2 176 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 GJC2Q5T442 439 aaPredicted RBP17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 PCNX4Q63HM2 1172 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 SEPT14Q6ZU15 432 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 DIS3LQ8TF46 1054 aaKnown RBP17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 PAWRQ96IZ0 340 aaKnown RBP17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 AP5M1Q9H0R1 490 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 UPF3AQ9H1J1 476 aaKnown RBP17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 C11orf49Q9H6J7 331 aa17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 ORC3Q9UBD5 711 aaPredicted RBP17.23■□□□□ 0.35
IGHV3-53-201ENST00000390627 CTDNEP1O95476 244 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 C6orf222P0C671 652 aaPredicted RBP17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 CST5P28325 142 aaPredicted RBP17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 MCM2P49736 904 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 CLK2P49760 499 aaKnown RBP17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 NLRP5P59047 1200 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 GNPTABQ3T906 1256 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 KCNV1Q6PIU1 500 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 REXO1Q8N1G1 1221 aaKnown RBP17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 NSUN7Q8NE18 718 aaKnown RBP17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 HTATIP2Q9BUP3 242 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 MRVI1Q9Y6F6 885 aa17.22■□□□□ 0.35
IGHV3-53-201ENST00000390627 TXNP10599 105 aaKnown RBP17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 NKX3-2P78367 333 aa17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 CCDC83Q8IWF9 413 aa17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 PCSK9Q8NBP7 692 aaKnown RBP17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 KLHDC9Q8NEP7 349 aa17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 TSEN34Q9BSV6 310 aaKnown RBP17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 ANO3Q9BYT9 981 aa17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 KIAA1217Q5T5P2 1943 aa17.21■□□□□ 0.35
IGHV3-53-201ENST00000390627 MOXD2PA6NHM9 499 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 DYNC1LI2O43237 492 aaPredicted RBP17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 ZEB2O60315 1214 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 COL6A1P12109 1028 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 MRPS9P82933 396 aaKnown RBP17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 ST3GAL1Q11201 340 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 GALNT17Q6IS24 598 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 CCDC62Q6P9F0 684 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 NLRX1Q86UT6 975 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 OR6J1Q8NGC5 347 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 AIFM3Q96NN9 605 aa17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 INPP4AQ96PE3 977 aaPredicted RBP17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 LLPHQ9BRT6 129 aaKnown RBP17.2■□□□□ 0.34
IGHV3-53-201ENST00000390627 MYADML2A6NDP7 307 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 RGS20O76081 388 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 ARIH2O95376 493 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 TGFB3P10600 412 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 SREBF1P36956 1147 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 FSCN1Q16658 493 aaKnown RBP17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 BRDTQ58F21 947 aaPredicted RBP17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 GNASQ5JWF2 1037 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 JAKMIP3Q5VZ66 844 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 PGBD1Q96JS3 809 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 ALG1Q9BT22 464 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 SENP6Q9GZR1 1112 aaPredicted RBP17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 TMEM260Q9NX78 707 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 PCDHA4Q9UN74 947 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 PHF24Q9UPV7 400 aa17.19■□□□□ 0.34
IGHV3-53-201ENST00000390627 FIBPO43427 364 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 JAK2O60674 1132 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 GH1P01241 217 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 ICAM3P32942 547 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 CPT1AP50416 773 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 HMGN5P82970 282 aaKnown RBP17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 KCNA10Q16322 511 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 LY6KQ17RY6 165 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 TMEM63BQ5T3F8 832 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 DAGLBQ8NCG7 672 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 ZFP91Q96JP5 570 aaPredicted RBP17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 CDHR1Q96JP9 859 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 RTEL1Q9NZ71 1219 aa17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 DDX41Q9UJV9 622 aaKnown RBP17.18■□□□□ 0.34
IGHV3-53-201ENST00000390627 MKI67P46013 3256 aaKnown RBP17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 CTAGE5O15320 804 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 FDPSP14324 419 aaKnown RBP17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 PTGS1P23219 599 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 ACLYP53396 1101 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 IRX5P78411 483 aaPredicted RBP17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 BEX3Q00994 111 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 CCSAPQ6IQ19 270 aaPredicted RBP17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 BLIDQ8IZY5 108 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 COPS5Q92905 334 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 GPRASP2Q96D09 838 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 PHF20Q9BVI0 1012 aa17.17■□□□□ 0.34
IGHV3-53-201ENST00000390627 A0A1W2PQ45 241 aaPredicted RBP17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 A0A1W2PQY0 241 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 DTNBO60941 627 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 ASGR1P07306 291 aa17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 UBA1P22314 1058 aaKnown RBP17.16■□□□□ 0.34
IGHV3-53-201ENST00000390627 ARHGAP4P98171 946 aa17.16■□□□□ 0.34
Retrieved 100 of 20,778 RNA–protein pairs in 41.7 ms