RNA–Protein interactions for RNA: ENST00000390612.3

IGHV4-28-201, Transcript of immunoglobulin heavy variable 4-28, humanhuman

APPRIS P1 BASIC

Gene IGHV4-28, Length 425 nt, Biotype IG V gene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV4-28-201ENST00000390612 RTN1Q16799 776 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 Q6ZUG5 572 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 FAM126BQ8IXS8 530 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 OR6J1Q8NGC5 347 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 EMID1Q96A84 441 aaPredicted RBP13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 TM6SF1Q9BZW5 370 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 SEC63Q9UGP8 760 aaKnown RBP13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 TBX21Q9UL17 535 aa13.15□□□□□ -0.3
IGHV4-28-201ENST00000390612 MROH7Q68CQ1 1323 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 MYO9BQ13459 2157 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 KAT6AQ92794 2004 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 hCG_1642624A0A1W2PR95 340 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 PQBP1O60828 265 aaKnown RBP13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 PSMA5P28066 241 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 CPT1AP50416 773 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 MRPS9P82933 396 aaKnown RBP13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 MDM2Q00987 491 aaPredicted RBP13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 APOBRQ0VD83 1088 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 LY6KQ17RY6 165 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 USP17L6PQ6QN14 398 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 SEPT14Q6ZU15 432 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 FCHSD1Q86WN1 690 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 TEX2Q8IWB9 1127 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 CCDC82Q8N4S0 544 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 IL17RAQ96F46 866 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 POLR3EQ9NVU0 708 aa13.14□□□□□ -0.31
IGHV4-28-201ENST00000390612 GOLGA8AA7E2F4 631 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 GOLGA8BA8MQT2 603 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 DCDC2CA8MYV0 355 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 KPNA6O60684 536 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 GH1P01241 217 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 TGFB3P10600 412 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 HOXD8P13378 290 aaPredicted RBP13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 CASTP20810 708 aaKnown RBP13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 CCND2P30279 289 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 ICAM3P32942 547 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 ADD1P35611 737 aaKnown RBP13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 ITGA7Q13683 1181 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 TYW1BQ6NUM6 668 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 KCNV1Q6PIU1 500 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 RUFY3Q7L099 469 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 BRF1Q92994 677 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 VTI1AQ96AJ9 217 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 INPP4AQ96PE3 977 aaPredicted RBP13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 UBE2OQ9C0C9 1292 aaKnown RBP13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 PRKAG2Q9UGJ0 569 aa13.13□□□□□ -0.31
IGHV4-28-201ENST00000390612 TET1Q8NFU7 2136 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 STAM2O75886 525 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 MYCLP12524 364 aaPredicted RBP13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 SP2Q02086 613 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 SEMA3FQ13275 785 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 TOB2Q14106 344 aaPredicted RBP13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 NTRK3Q16288 839 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 LRIT3Q3SXY7 679 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 MYSM1Q5VVJ2 828 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 WWC2Q6AWC2 1192 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 XRRA1Q6P2D8 792 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 TDHQ8IZJ6 230 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 AFG1LQ8WV93 481 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 BADQ92934 168 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 LBHD1Q9BQE6 289 aaPredicted RBP13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 MTG1Q9BT17 334 aaPredicted RBP13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 PSTPIP2Q9H939 334 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 PRDM5Q9NQX1 630 aaPredicted RBP13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 TMEM39AQ9NV64 488 aa13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 V9GY48 417 aaPredicted RBP13.12□□□□□ -0.31
IGHV4-28-201ENST00000390612 COL6A3P12111 3177 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 CCDC196A0A1B0GTZ2 297 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 STXBP3O00186 592 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 TIMP1P01033 207 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 MMP3P08254 477 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 PDIA3P30101 505 aaKnown RBP13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 METAP2P50579 478 aaKnown RBP eCLIP13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 PSMC6P62333 389 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 LAMC2Q13753 1193 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 BRDTQ58F21 947 aaPredicted RBP13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 CELF3Q5SZQ8 465 aaKnown RBP13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 PCNX4Q63HM2 1172 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 SMARCC2Q8TAQ2 1214 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 KAT2BQ92831 832 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 GPKOWQ92917 476 aaPredicted RBP eCLIP13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 CUL5Q93034 780 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 MRVI1Q9Y6F6 885 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 SCN5AQ14524 2016 aa13.11□□□□□ -0.31
IGHV4-28-201ENST00000390612 WDR81Q562E7 1941 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 SPATA31C2B4DYI2 1134 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 hCG_1984214I3L0E3 225 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 SOX1O00570 391 aaPredicted RBP13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 B4GALT4O60513 344 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 MYL3P08590 195 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 FGD1P98174 961 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 PKN1Q16512 942 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 NBPF20Q3BBV1 942 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 PPP1R18Q6NYC8 613 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 NFRKBQ6P4R8 1299 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 HEATR3Q7Z4Q2 680 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 ZNF713Q8N859 430 aaPredicted RBP13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 PPTC7Q8NI37 304 aa13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 ZFP91Q96JP5 570 aaPredicted RBP13.1□□□□□ -0.31
IGHV4-28-201ENST00000390612 ALDH8A1Q9H2A2 487 aaPredicted RBP13.1□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms