RNA–Protein interactions for RNA: ENST00000389373.3

IFT88-203, Transcript of intraflagellar transport 88, humanhuman

TSL 4

Gene IFT88, Length 575 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IFT88-203ENST00000389373 PPP4R3BQ5MIZ7 849 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 ZNF618Q5T7W0 954 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 SEPT14Q6ZU15 432 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 SIRT2Q8IXJ6 389 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 KBTBD3Q8NAB2 608 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 CTAGE1Q96RT6 745 aa11.39□□□□□ -0.59
IFT88-203ENST00000389373 TANC1Q9C0D5 1861 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 C19orf67A6NJJ6 358 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 ST18O60284 1047 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 RANBP6O60518 1105 aaKnown RBP11.38□□□□□ -0.59
IFT88-203ENST00000389373 LGR5O75473 907 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 CSPG5O95196 566 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 GH1P01241 217 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 PSEN2P49810 448 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 ZNF200P98182 395 aaPredicted RBP11.38□□□□□ -0.59
IFT88-203ENST00000389373 IER5LQ5T953 404 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 RPAINQ86UA6 219 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 PRSS33Q8NF86 280 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 DBF4BQ8NFT6 615 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 DCAF4Q8WV16 495 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 CLEC4DQ8WXI8 215 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 KAT2BQ92831 832 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 YME1L1Q96TA2 773 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 SEC62Q99442 399 aaKnown RBP11.38□□□□□ -0.59
IFT88-203ENST00000389373 NSUN3Q9H649 340 aaKnown RBP11.38□□□□□ -0.59
IFT88-203ENST00000389373 IL17RBQ9NRM6 502 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 GTF2IRD1Q9UHL9 959 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 PLIN4Q96Q06 1357 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 TRANK1O15050 2925 aa11.38□□□□□ -0.59
IFT88-203ENST00000389373 TRIP12Q14669 1992 aaPredicted RBP11.37□□□□□ -0.59
IFT88-203ENST00000389373 SCN10AQ9Y5Y9 1956 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 H3BNC9 293 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 PTPN5P54829 565 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 PTK7Q13308 1070 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 TSHZ3Q63HK5 1081 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 PPP4R3CPQ6ZMV5 832 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 SESTD1Q86VW0 696 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 RNF135Q8IUD6 432 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 DHX37Q8IY37 1157 aaKnown RBP11.37□□□□□ -0.59
IFT88-203ENST00000389373 TMEM192Q8IY95 271 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 DNERQ8NFT8 737 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 WNT8BQ93098 351 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 PBXIP1Q96AQ6 731 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 SAMD11Q96NU1 681 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 LRRCC1Q9C099 1032 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 IGFLR1Q9H665 355 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 TOMM22Q9NS69 142 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 ECHDC1Q9NTX5 307 aa11.37□□□□□ -0.59
IFT88-203ENST00000389373 STXBP3O00186 592 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 SORBS3O60504 671 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 ZFYP08048 801 aaPredicted RBP11.36□□□□□ -0.59
IFT88-203ENST00000389373 EDNRBP24530 442 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 ARHGAP1Q07960 439 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 RBL2Q08999 1139 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 MFSD10Q14728 455 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 DGKDQ16760 1214 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 KIAA0753Q2KHM9 967 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 USH1GQ495M9 461 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 CCDC62Q6P9F0 684 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 POP1Q99575 1024 aaKnown RBP11.36□□□□□ -0.59
IFT88-203ENST00000389373 FAM86C1Q9NVL1 165 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 LCTP09848 1927 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 MYH7P12883 1935 aa11.36□□□□□ -0.59
IFT88-203ENST00000389373 SIP14410 1827 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 RSPH10B2B2RC85 870 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 MBTPS2O43462 519 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 GFRA3O60609 400 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 RSPH10BP0C881 870 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 ZNF286BP0CG31 522 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 THPOP40225 353 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 HTRA4P83105 476 aaPredicted RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 DLX2Q07687 328 aaPredicted RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 MBTPS1Q14703 1052 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 TRIM71Q2Q1W2 868 aaKnown RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 HERC4Q5GLZ8 1057 aaPredicted RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 RRP12Q5JTH9 1297 aaKnown RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 BTNL9Q6UXG8 535 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 FBXO11Q86XK2 927 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 SUGP1Q8IWZ8 645 aaKnown RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 SP7Q8TDD2 431 aaPredicted RBP11.35□□□□□ -0.59
IFT88-203ENST00000389373 EDAQ92838 391 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 GPATCH3Q96I76 525 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 TAAR1Q96RJ0 339 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 KATNAL1Q9BW62 490 aa11.35□□□□□ -0.59
IFT88-203ENST00000389373 PIEZO1Q92508 2521 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 TMEM221A6NGB7 291 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 M0R296 226 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 CTNNB1P35222 781 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 GTF2F1P35269 517 aaKnown RBP eCLIP11.34□□□□□ -0.59
IFT88-203ENST00000389373 LTBRP36941 435 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 SMAD2Q15796 467 aaKnown RBP11.34□□□□□ -0.59
IFT88-203ENST00000389373 TRAF7Q6Q0C0 670 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 TBC1D5Q92609 795 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 DDX52Q9Y2R4 599 aaKnown RBP eCLIP11.34□□□□□ -0.59
IFT88-203ENST00000389373 EMSYQ7Z589 1322 aa11.34□□□□□ -0.59
IFT88-203ENST00000389373 NCK2O43639 380 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 MS4A1P11836 297 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 HYAL1Q12794 435 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 STXBP2Q15833 593 aa11.33□□□□□ -0.6
IFT88-203ENST00000389373 PLEKHG4Q58EX7 1191 aa11.33□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms