RNA–Protein interactions for RNA: ENST00000389103.4

UBE3C-202, Transcript of ubiquitin protein ligase E3C, humanhuman

TSL 5 BASIC

Gene UBE3C, Length 1,626 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE3C-202ENST00000389103 SLC12A7Q9Y666 1083 aa16.31■□□□□ 0.2
UBE3C-202ENST00000389103 MMP3P08254 477 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 SMARCA1P28370 1054 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 NBPF20Q3BBV1 942 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 VSIG10LQ86VR7 867 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 TMEM199Q8N511 208 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 BUD13Q9BRD0 619 aaKnown RBP eCLIP16.3■□□□□ 0.25e-7■■□□□ 12.6
UBE3C-202ENST00000389103 MRVI1Q9Y6F6 885 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 KIAA1217Q5T5P2 1943 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 CALM1P0DP23 149 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 CALM2P0DP24 149 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 CALM3P0DP25 149 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 EXOSC10Q01780 885 aaKnown RBP16.3■□□□□ 0.2
UBE3C-202ENST00000389103 PPIGQ13427 754 aaKnown RBP eCLIP16.3■□□□□ 0.22e-8■■■□□ 16.9
UBE3C-202ENST00000389103 TSGA10IPQ3SY00 556 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 SGMS1Q86VZ5 419 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 MICU3Q86XE3 530 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 LZTS2Q9BRK4 669 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 NOC4LQ9BVI4 516 aaKnown RBP16.3■□□□□ 0.2
UBE3C-202ENST00000389103 MTMR10Q9NXD2 777 aa16.3■□□□□ 0.2
UBE3C-202ENST00000389103 hCG_1642624A0A1W2PR95 340 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 KPNA6O60684 536 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 ACRP10323 421 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 CYP2C9P11712 490 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 GNAQP50148 359 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 CCL23P55773 120 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 FAM47CQ5HY64 1035 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 CCDC82Q8N4S0 544 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 FANCBQ8NB91 859 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 GPKOWQ92917 476 aaPredicted RBP eCLIP16.29■□□□□ 0.28e-6■■■□□ 18.6
UBE3C-202ENST00000389103 WNT8AQ9H1J5 351 aa16.29■□□□□ 0.2
UBE3C-202ENST00000389103 SEC63Q9UGP8 760 aaKnown RBP16.29■□□□□ 0.2
UBE3C-202ENST00000389103 SORBS3O60504 671 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 CCND2P30279 289 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 CHMP4BP1P59074 171 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 TMEM240Q5SV17 173 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 USP17L6PQ6QN14 398 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 TMTC3Q6ZXV5 915 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 DHX32Q7L7V1 743 aaKnown RBP16.28■□□□□ 0.2
UBE3C-202ENST00000389103 FAM161BQ96MY7 647 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 BRPF3Q9ULD4 1205 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 SCN10AQ9Y5Y9 1956 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 FRMPD4Q14CM0 1322 aa16.28■□□□□ 0.2
UBE3C-202ENST00000389103 SMAD3P84022 425 aaKnown RBP16.27■□□□□ 0.2
UBE3C-202ENST00000389103 SP2Q02086 613 aa16.27■□□□□ 0.2
UBE3C-202ENST00000389103 FAM109BQ6ICB4 259 aaPredicted RBP16.27■□□□□ 0.2
UBE3C-202ENST00000389103 NFRKBQ6P4R8 1299 aa16.27■□□□□ 0.2
UBE3C-202ENST00000389103 APOA5Q6Q788 366 aa16.27■□□□□ 0.2
UBE3C-202ENST00000389103 DHX37Q8IY37 1157 aaKnown RBP16.27■□□□□ 0.2
UBE3C-202ENST00000389103 KAT2BQ92831 832 aa16.27■□□□□ 0.2
UBE3C-202ENST00000389103 EMID1Q96A84 441 aaPredicted RBP16.27■□□□□ 0.2
UBE3C-202ENST00000389103 MEIS2O14770 477 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 SUPT20HL2P0C7V6 817 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 CPA1P15085 419 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 MRPS9P82933 396 aaKnown RBP16.27■□□□□ 0.19
UBE3C-202ENST00000389103 ZNF365Q70YC5 407 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 SMARCC2Q8TAQ2 1214 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 SCLYQ96I15 445 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 IL23AQ9NPF7 189 aa16.27■□□□□ 0.19
UBE3C-202ENST00000389103 NEFLP07196 543 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 CASTP20810 708 aaKnown RBP16.26■□□□□ 0.19
UBE3C-202ENST00000389103 UBA1P22314 1058 aaKnown RBP16.26■□□□□ 0.19
UBE3C-202ENST00000389103 LAMC2Q13753 1193 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 KRT32Q14532 448 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 DGKDQ16760 1214 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 ZNF697Q5TEC3 545 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 SYNE3Q6ZMZ3 975 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 PPTC7Q8NI37 304 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 KCNB2Q92953 911 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 GUCD1Q96NT3 240 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 BCAS3Q9H6U6 928 aa16.26■□□□□ 0.19
UBE3C-202ENST00000389103 PIK3CDO00329 1044 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 GGPS1O95749 300 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 ZNF286BP0CG31 522 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 HSPA4P34932 840 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 PTPN11Q06124 597 aaPredicted RBP16.25■□□□□ 0.19
UBE3C-202ENST00000389103 HSDL1Q3SXM5 330 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 CELF3Q5SZQ8 465 aaKnown RBP16.25■□□□□ 0.19
UBE3C-202ENST00000389103 RASIP1Q5U651 963 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 MYSM1Q5VVJ2 828 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 PSRC1Q6PGN9 363 aaPredicted RBP16.25■□□□□ 0.19
UBE3C-202ENST00000389103 KCNV1Q6PIU1 500 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 CUL5Q93034 780 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 VWCEQ96DN2 955 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 RTEL1Q9NZ71 1219 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 CNTNAP5Q8WYK1 1306 aa16.25■□□□□ 0.19
UBE3C-202ENST00000389103 SPATA33Q96N06 139 aa16.24■□□□□ 0.19
UBE3C-202ENST00000389103 INPP4AQ96PE3 977 aaPredicted RBP16.24■□□□□ 0.19
UBE3C-202ENST00000389103 CTAGE1Q96RT6 745 aa16.24■□□□□ 0.19
UBE3C-202ENST00000389103 TTYH1Q9H313 450 aaPredicted RBP16.24■□□□□ 0.19
UBE3C-202ENST00000389103 PSTPIP2Q9H939 334 aa16.24■□□□□ 0.19
UBE3C-202ENST00000389103 SNX14Q9Y5W7 946 aa16.24■□□□□ 0.19
UBE3C-202ENST00000389103 COL6A3P12111 3177 aa16.24■□□□□ 0.19
UBE3C-202ENST00000389103 KLF18A0A0U1RQI7 1052 aa16.23■□□□□ 0.19
UBE3C-202ENST00000389103 HSFX4A0A1B0GTS1 333 aaPredicted RBP16.23■□□□□ 0.19
UBE3C-202ENST00000389103 HSFX3A0A1B0GWH4 333 aaPredicted RBP16.23■□□□□ 0.19
UBE3C-202ENST00000389103 ZBTB43O43298 467 aa16.23■□□□□ 0.19
UBE3C-202ENST00000389103 TGFB3P10600 412 aa16.23■□□□□ 0.19
UBE3C-202ENST00000389103 HOXD8P13378 290 aaPredicted RBP16.23■□□□□ 0.19
UBE3C-202ENST00000389103 FUT2Q10981 343 aa16.23■□□□□ 0.19
Retrieved 100 of 20,778 RNA–protein pairs in 63.6 ms