RNA–Protein interactions for RNA: ENST00000384161.1

RNU6-48P-201, Transcript of RNA, U6 small nuclear 48, pseudogene, humanhuman

BASIC

Gene RNU6-48P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-48P-201ENST00000384161 SF1Q15637 639 aaKnown RBP4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 SPATS1Q496A3 300 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 OLFML2BQ68BL8 750 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 MAMDC2Q7Z304 686 aaPredicted RBP4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 ZNF605Q86T29 641 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 CABP7Q86V35 215 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 CPNE8Q86YQ8 564 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 NUP43Q8NFH3 380 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 PTPRN2Q92932 1015 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 SHISA4Q96DD7 197 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 INTS4Q96HW7 963 aaKnown RBP4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 MYRFQ9Y2G1 1151 aa4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 MRPS23Q9Y3D9 190 aaKnown RBP4.12□□□□□ -1.75
RNU6-48P-201ENST00000384161 TLDC2A0PJX2 215 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 HRKO00198 91 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 AQP7O14520 342 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 SUV39H1O43463 412 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 IGSF3O75054 1194 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 EFCAB14O75071 495 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 ERVFRD-1P60508 538 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 MVKQ03426 396 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 LSAMPQ13449 338 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 FAM209AQ5JX71 171 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 STYK1Q6J9G0 422 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 USP53Q70EK8 1073 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 HOMER1Q86YM7 354 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 IFNL3Q8IZI9 196 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 LZTR1Q8N653 840 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 USP33Q8TEY7 942 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 SH3TC2Q8TF17 1288 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 KISS1RQ969F8 398 aaPredicted RBP4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 RNPC3Q96LT9 517 aaKnown RBP4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 TEPSINQ96N21 525 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 MRPL4Q9BYD3 311 aaKnown RBP4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 TMEM260Q9NX78 707 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 IMPACTQ9P2X3 320 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 TMA7Q9Y2S6 64 aaKnown RBP4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 PTCH2Q9Y6C5 1203 aa4.11□□□□□ -1.75
RNU6-48P-201ENST00000384161 OR14I1A6ND48 311 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 H7BY64 318 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 SRGAP3O43295 1099 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 INSRRP14616 1297 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 PI3P19957 117 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 GPR85P60893 370 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 INF2Q27J81 1249 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 PRSS53Q2L4Q9 553 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 YOD1Q5VVQ6 348 aaPredicted RBP4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 FOXB2Q5VYV0 432 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 DENND5AQ6IQ26 1287 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 CCDC103Q8IW40 242 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 RCBTB1Q8NDN9 531 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 APPBP2Q92624 585 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 EXOC2Q96KP1 924 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 PLCD4Q9BRC7 762 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 PHF20Q9BVI0 1012 aa4.1□□□□□ -1.75
RNU6-48P-201ENST00000384161 RFXAPO00287 272 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 PLD2O14939 933 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 KCNQ2O43526 872 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 CLSTN1O94985 981 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 ZBTB7AO95365 584 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 CYBBP04839 570 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 PDE6BP35913 854 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 SQSTM1Q13501 440 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 CBX2Q14781 532 aaPredicted RBP4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TCEA2Q15560 299 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 CHRNA2Q15822 529 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 NTRK3Q16288 839 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 KIZQ2M2Z5 673 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 FNDC3BQ53EP0 1204 aaKnown RBP4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TRIM61Q5EBN2 209 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TAF7LQ5H9L4 462 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 MROH9Q5TGP6 573 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 BICRALQ6AI39 1079 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 PAQR3Q6TCH7 311 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 RIOX2Q8IUF8 465 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 Q8N1Y9 231 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 NETO2Q8NC67 525 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TRMT2BQ96GJ1 504 aaKnown RBP4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TMEM169Q96HH4 297 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 CHAMP1Q96JM3 812 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 ALG1Q9BT22 464 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 MTA3Q9BTC8 594 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TNFRSF12AQ9NP84 129 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 GULP1Q9UBP9 304 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TMEFF2Q9UIK5 374 aaPredicted RBP4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 MBD1Q9UIS9 605 aaPredicted RBP4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 NUDT5Q9UKK9 219 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 COA3Q9Y2R0 106 aaPredicted RBP4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 TBX22Q9Y458 520 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 PCDHA2Q9Y5H9 948 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 X6R8D5 127 aa4.09□□□□□ -1.75
RNU6-48P-201ENST00000384161 C22orf46C9J442 243 aa4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 ARNTLO00327 626 aa4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 ENPP3O14638 875 aa4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 GSTA4O15217 222 aa4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 RFPL3O75679 317 aa4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 FUCA1P04066 466 aa4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 C6orf222P0C671 652 aaPredicted RBP4.08□□□□□ -1.76
RNU6-48P-201ENST00000384161 GLI4P10075 376 aa4.08□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 31.3 ms