RNA–Protein interactions for RNA: ENST00000381150.5

SDC1-202, Transcript of syndecan 1, humanhuman

APPRIS P1 TSL 5 BASIC

Gene SDC1, Length 3,291 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC1-202ENST00000381150 CCT8L2Q96SF2 557 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 DONSONQ9NYP3 566 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 JAG2Q9Y219 1238 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 EIF4E1BA6NMX2 242 aaKnown RBP15.33■□□□□ 0.04
SDC1-202ENST00000381150 EPHB4P54760 987 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 RASSF7Q02833 373 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 NFIXQ14938 502 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 SPATA20Q8TB22 786 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 HPS3Q969F9 1004 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 KRT12Q99456 494 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 BAIAP2L1Q9UHR4 511 aa15.33■□□□□ 0.04
SDC1-202ENST00000381150 HGSO14964 777 aaPredicted RBP15.32■□□□□ 0.04
SDC1-202ENST00000381150 CHUKO15111 745 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 SHOX2O60902 331 aaPredicted RBP15.32■□□□□ 0.04
SDC1-202ENST00000381150 VEGFAP15692 232 aaPredicted RBP15.32■□□□□ 0.04
SDC1-202ENST00000381150 ELF1P32519 619 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 PEX19P40855 299 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 CCDC13Q8IYE1 715 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 AENQ8WTP8 325 aaKnown RBP15.32■□□□□ 0.04
SDC1-202ENST00000381150 ARPP21Q9UBL0 812 aaPredicted RBP15.32■□□□□ 0.04
SDC1-202ENST00000381150 PSMA7O14818 248 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 FTCDO95954 541 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 PAX7P23759 505 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 TMOD1P28289 359 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 GRIK5Q16478 980 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 OSBPL9Q96SU4 736 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP15.32■□□□□ 0.04
SDC1-202ENST00000381150 HAUS2Q9NVX0 235 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 SNX12Q9UMY4 172 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 CNPY4Q8N129 248 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 PRPF38AQ8NAV1 312 aaKnown RBP15.32■□□□□ 0.04
SDC1-202ENST00000381150 LRRC4BQ9NT99 713 aa15.32■□□□□ 0.04
SDC1-202ENST00000381150 ITIH6Q6UXX5 1313 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 SMIM23A6NLE4 172 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 ADAMTS3O15072 1205 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 USP17L8P0C7I0 530 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 UBA7P41226 1012 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 MAGEA1P43355 309 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 GSCP56915 257 aaPredicted RBP15.31■□□□□ 0.04
SDC1-202ENST00000381150 RRAGAQ7L523 313 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 CACNA2D4Q7Z3S7 1137 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 NLRP14Q86W24 1093 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 NLRC4Q9NPP4 1024 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 IL17RBQ9NRM6 502 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 EXOC1Q9NV70 894 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 GRAPQ13588 217 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 TRAPPC3LQ5T215 181 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 C12orf60Q5U649 245 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 CREG2Q8IUH2 290 aa15.31■□□□□ 0.04
SDC1-202ENST00000381150 GRAPLQ8TC17 118 aaPredicted RBP15.31■□□□□ 0.04
SDC1-202ENST00000381150 LGALS16A8MUM7 142 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 GLI1P08151 1106 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 ZNF658Q5TYW1 1059 aaPredicted RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 PNMA8AQ86V59 439 aaPredicted RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 TRIM58Q8NG06 486 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 MTRQ99707 1265 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 SLC40A1Q9NP59 571 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 LEMD3Q9Y2U8 911 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 UBAP1LF5GYI3 381 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 H7C1D1 291 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 PPP1R37O75864 691 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 EZRP15311 586 aaKnown RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 RFC4P35249 363 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 EIF4A3P38919 411 aaKnown RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 C15orf52Q6ZUT6 534 aaKnown RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 CDC25CP30307 473 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 SPTY2D1Q68D10 685 aaPredicted RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 FAM196AQ6ZSG2 479 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 CPLX4Q7Z7G2 160 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 UBLCP1Q8WVY7 318 aaPredicted RBP15.3■□□□□ 0.04
SDC1-202ENST00000381150 FERMT2Q96AC1 680 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 RMND1Q9NWS8 449 aa15.3■□□□□ 0.04
SDC1-202ENST00000381150 CDK5RAP2Q96SN8 1893 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 GTPBP6O43824 516 aaPredicted RBP15.29■□□□□ 0.04
SDC1-202ENST00000381150 ONECUT3O60422 494 aaPredicted RBP15.29■□□□□ 0.04
SDC1-202ENST00000381150 SNCBQ16143 134 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 IFT20Q8IY31 132 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 ANKS1AQ92625 1134 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 CAPN11Q9UMQ6 739 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 PCDHA13Q9Y5I0 950 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 OPLAHO14841 1288 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 NKRFO15226 690 aaKnown RBP eCLIP15.29■□□□□ 0.044e-6■■□□□ 11.7
SDC1-202ENST00000381150 CHRM1P11229 460 aaPredicted RBP15.29■□□□□ 0.04
SDC1-202ENST00000381150 ASIC1P78348 528 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 GFPT1Q06210 699 aaPredicted RBP15.29■□□□□ 0.04
SDC1-202ENST00000381150 SH3RF1Q7Z6J0 888 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 CNOT6LQ96LI5 555 aaKnown RBP15.29■□□□□ 0.04
SDC1-202ENST00000381150 TRIM31Q9BZY9 425 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 EPN3Q9H201 632 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 MCM9Q9NXL9 1143 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 HYOU1Q9Y4L1 999 aa15.29■□□□□ 0.04
SDC1-202ENST00000381150 DNM2P50570 870 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 PPP4CP60510 307 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 EHHADHQ08426 723 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 LRCH2Q5VUJ6 765 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 IRF2BP1Q8IU81 584 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 WDR66Q8TBY9 1149 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 MYCBPAPQ8TBZ2 947 aa15.28■□□□□ 0.04
SDC1-202ENST00000381150 SH3RF3Q8TEJ3 882 aaPredicted RBP15.28■□□□□ 0.04
SDC1-202ENST00000381150 SH3GL2Q99962 352 aa15.28■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 51.7 ms