RNA–Protein interactions for RNA: ENST00000380815.4

GMDS-202, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene GMDS, Length 1,752 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-202ENST00000380815 CLEC4DQ8WXI8 215 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 RAD54LQ92698 747 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 NT5C3AQ9H0P0 336 aa24.11■■□□□ 1.45
GMDS-202ENST00000380815 IGLV3-22A0A075B6J6 115 aa24.1■■□□□ 1.45
GMDS-202ENST00000380815 SPIRE1Q08AE8 756 aa24.1■■□□□ 1.45
GMDS-202ENST00000380815 CCDC186Q7Z3E2 898 aa24.1■■□□□ 1.45
GMDS-202ENST00000380815 SAMD3Q8N6K7 520 aa24.1■■□□□ 1.45
GMDS-202ENST00000380815 GTPBP4Q9BZE4 634 aaKnown RBP24.1■■□□□ 1.45
GMDS-202ENST00000380815 MAP3K20Q9NYL2 800 aaKnown RBP24.1■■□□□ 1.45
GMDS-202ENST00000380815 RABGAP1Q9Y3P9 1069 aa24.1■■□□□ 1.45
GMDS-202ENST00000380815 SYNRGQ9UMZ2 1314 aa24.1■■□□□ 1.45
GMDS-202ENST00000380815 VWA5AO00534 786 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 MSH4O15457 936 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 CBFA2T2O43439 604 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 CLCN1P35523 988 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 HMGCS2P54868 508 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 KLHL10Q6JEL2 608 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 CPXCR1Q8N123 301 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 CCDC47Q96A33 483 aaKnown RBP24.09■■□□□ 1.45
GMDS-202ENST00000380815 ZNF830Q96NB3 372 aaPredicted RBP24.09■■□□□ 1.45
GMDS-202ENST00000380815 LRRC27Q9C0I9 530 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 RAVER2Q9HCJ3 691 aaKnown RBP24.09■■□□□ 1.45
GMDS-202ENST00000380815 NRBP1Q9UHY1 535 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 AFG3L2Q9Y4W6 797 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 CTDP1Q9Y5B0 961 aaPredicted RBP24.09■■□□□ 1.45
GMDS-202ENST00000380815 STK24Q9Y6E0 443 aa24.09■■□□□ 1.45
GMDS-202ENST00000380815 SERPINC1P01008 464 aa24.08■■□□□ 1.45
GMDS-202ENST00000380815 CCT6AP40227 531 aaKnown RBP24.08■■□□□ 1.45
GMDS-202ENST00000380815 MAP3K9P80192 1104 aa24.08■■□□□ 1.45
GMDS-202ENST00000380815 CYP2W1Q8TAV3 490 aa24.08■■□□□ 1.45
GMDS-202ENST00000380815 RWDD2AQ9UIY3 292 aa24.08■■□□□ 1.45
GMDS-202ENST00000380815 ALAS1P13196 640 aa24.08■■□□□ 1.44
GMDS-202ENST00000380815 PTGS1P23219 599 aa24.08■■□□□ 1.44
GMDS-202ENST00000380815 ECM1Q16610 540 aa24.08■■□□□ 1.44
GMDS-202ENST00000380815 HAUS3Q68CZ6 603 aa24.08■■□□□ 1.44
GMDS-202ENST00000380815 CNNM4Q6P4Q7 775 aa24.08■■□□□ 1.44
GMDS-202ENST00000380815 USP50Q70EL3 339 aaPredicted RBP24.08■■□□□ 1.44
GMDS-202ENST00000380815 GIMAP8Q8ND71 665 aaPredicted RBP24.08■■□□□ 1.44
GMDS-202ENST00000380815 PARP14Q460N5 1801 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 ADM5C9JUS6 153 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 NFIBO00712 420 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 ZNF500O60304 480 aaPredicted RBP24.07■■□□□ 1.44
GMDS-202ENST00000380815 UBASH3AP57075 661 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 ASIC1P78348 528 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 PRKG1Q13976 671 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 MCM6Q14566 821 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 PPP1R3FQ6ZSY5 799 aaPredicted RBP24.07■■□□□ 1.44
GMDS-202ENST00000380815 ERMNQ8TAM6 284 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 TMOD4Q9NZQ9 345 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 GDAQ9Y2T3 454 aa24.07■■□□□ 1.44
GMDS-202ENST00000380815 PPP1R12BO60237 982 aaPredicted RBP24.06■■□□□ 1.44
GMDS-202ENST00000380815 PRCPP42785 496 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 PAK1Q13153 545 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 VGLL4Q14135 290 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 CCDC144BQ3MJ40 725 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 CEP55Q53EZ4 464 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 KRT26Q7Z3Y9 468 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 KCNK18Q7Z418 384 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 ADSSL1Q8N142 457 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 RBM46Q8TBY0 533 aaKnown RBP24.06■■□□□ 1.44
GMDS-202ENST00000380815 ZC3H15Q8WU90 426 aaKnown RBP24.06■■□□□ 1.44
GMDS-202ENST00000380815 ATG4CQ96DT6 458 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 UIMC1Q96RL1 719 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 KCNF1Q9H3M0 494 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 SAMSN1Q9NSI8 373 aaKnown RBP24.06■■□□□ 1.44
GMDS-202ENST00000380815 IMPACTQ9P2X3 320 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 ADAMTS5Q9UNA0 930 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 CTNND2Q9UQB3 1225 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 SNCAIPQ9Y6H5 919 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 RPTORQ8N122 1335 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 CDK11BP21127 795 aaKnown RBP24.06■■□□□ 1.44
GMDS-202ENST00000380815 OAZ1P54368 228 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 STX17P56962 302 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 COG2Q14746 738 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 SH3D19Q5HYK7 790 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 EXOC1Q9NV70 894 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 VAV3Q9UKW4 847 aa24.06■■□□□ 1.44
GMDS-202ENST00000380815 ZC3H4Q9UPT8 1303 aaKnown RBP24.05■■□□□ 1.44
GMDS-202ENST00000380815 PVALEFA0A1B0GWK0 134 aa24.05■■□□□ 1.44
GMDS-202ENST00000380815 MYMKA6NI61 221 aa24.05■■□□□ 1.44
GMDS-202ENST00000380815 DSG3P32926 999 aa24.05■■□□□ 1.44
GMDS-202ENST00000380815 STAT3P40763 770 aa24.05■■□□□ 1.44
GMDS-202ENST00000380815 DHX8Q14562 1220 aaKnown RBP24.05■■□□□ 1.44
GMDS-202ENST00000380815 MEIS1O00470 390 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 SETQ01105 290 aaPredicted RBP24.04■■□□□ 1.44
GMDS-202ENST00000380815 PDE4DQ08499 809 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 STIM1Q13586 685 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 MUM1L1Q5H9M0 696 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 CDKAL1Q5VV42 579 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 DLK2Q6UY11 383 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 CATSPERGQ6ZRH7 1159 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 REPS2Q8NFH8 660 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 NELFBQ8WX92 580 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 RTN4Q9NQC3 1192 aaKnown RBP24.04■■□□□ 1.44
GMDS-202ENST00000380815 COL20A1Q9P218 1284 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 KIAA1024Q9UPX6 916 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 RLFQ13129 1914 aa24.04■■□□□ 1.44
GMDS-202ENST00000380815 RPA1P27694 616 aa24.03■■□□□ 1.44
GMDS-202ENST00000380815 EPHX2P34913 555 aa24.03■■□□□ 1.44
GMDS-202ENST00000380815 UBXN2AP68543 259 aa24.03■■□□□ 1.44
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms