RNA–Protein interactions for RNA: ENST00000380281.5

PRPF40B-202, Transcript of pre-mRNA processing factor 40 homolog B, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PRPF40B, Length 3,154 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40B-202ENST00000380281 RASSF10A6NK89 507 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 FTCDO95954 541 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 CEP85LQ5SZL2 805 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 TRMT1LQ7Z2T5 733 aaKnown RBP13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 TRAPPC11Q7Z392 1133 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 AMOTL1Q8IY63 956 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 SH2D3CQ8N5H7 860 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 SCLT1Q96NL6 688 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 SEC63Q9UGP8 760 aaKnown RBP13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 CAPN11Q9UMQ6 739 aa13.77□□□□□ -0.2
PRPF40B-202ENST00000380281 MEFVO15553 781 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 OR52Z1P0C646 297 aa13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 DHX30Q7L2E3 1194 aaKnown RBP eCLIP13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 TRIM6Q9C030 488 aaPredicted RBP13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 LAMB4A4D0S4 1761 aa13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 LRRC53A6NM62 1247 aa13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 USP17L5A8MUK1 530 aa13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 SEMA3EO15041 775 aa13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 EYA3Q99504 573 aa13.77□□□□□ -0.21
PRPF40B-202ENST00000380281 UTRNP46939 3433 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 TRAF5O00463 557 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 RIMBP2O15034 1052 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 MAGEA1P43355 309 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 INHBEP58166 350 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 NAA25Q14CX7 972 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 NONOQ15233 471 aaKnown RBP eCLIP13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 AMIGO3Q86WK7 504 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 KIAA0895Q8NCT3 520 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 ARL8AQ96BM9 186 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 CALML4Q96GE6 196 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 SEMA6BQ9H3T3 888 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 DDX20Q9UHI6 824 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 ITIH6Q6UXX5 1313 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 NPHP3-ACAD11A0A0J9YXS1 232 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 MPHOSPH10O00566 681 aaKnown RBP13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 PPP1R12BO60237 982 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 TRIM14Q14142 442 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 CCDC40Q4G0X9 1142 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 C12orf60Q5U649 245 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 GIMAP8Q8ND71 665 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 ZNF507Q8TCN5 953 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 ATP8A2Q9NTI2 1148 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 ARHGAP20Q9P2F6 1191 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 ARPP21Q9UBL0 812 aaPredicted RBP13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 SALL4Q9UJQ4 1053 aa13.76□□□□□ -0.21
PRPF40B-202ENST00000380281 STXBP3O00186 592 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 FSBPO95073 299 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 CCNE1P24864 410 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 PEX19P40855 299 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 KIF11P52732 1056 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 TRADDQ15628 312 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 KCNK18Q7Z418 384 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 FBXO33Q7Z6M2 555 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SNX29Q8TEQ0 813 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 TBC1D22AQ8WUA7 517 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 MYMKA6NI61 221 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SRGNP10124 158 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 EEF1GP26641 437 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 TRAPPC10P48553 1259 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SNAP25P60880 206 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 ZNF526Q8TF50 670 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 CEP95Q96GE4 821 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 PCDHA13Q9Y5I0 950 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 ADAMTSL3P82987 1691 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 EP400Q96L91 3159 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 EME2A4GXA9 379 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 FAM196BA6NMK8 535 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 USO1O60763 962 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 TUBBP07437 444 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SLC1A4P43007 532 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 TUBB4BP68371 445 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 IFT88Q13099 833 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SF3B2Q13435 895 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 ARL6IP4Q66PJ3 421 aaKnown RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SPTY2D1Q68D10 685 aaPredicted RBP13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SLC30A10Q6XR72 485 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 SV2BQ7L1I2 683 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 KLHL7Q8IXQ5 586 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 RUFY1Q96T51 708 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 DNAJC7Q99615 494 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 NDST4Q9H3R1 872 aa13.75□□□□□ -0.21
PRPF40B-202ENST00000380281 ECM29Q5VYK3 1845 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 SLC37A4O43826 429 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 ORC4O43929 436 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 TACC1O75410 805 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 TAL1P17542 331 aaPredicted RBP13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 BTDP43251 543 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 ZBED6P86452 979 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 NEK8Q86SG6 692 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 CCDC13Q8IYE1 715 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 NUP98P52948 1817 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 KRT14P02533 472 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 KRT18P05783 430 aaKnown RBP13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 TUBB2AQ13885 445 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 RAPGEF1Q13905 1077 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 CCDC70Q6NSX1 233 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 B4GALNT4Q76KP1 1039 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 TUBB2BQ9BVA1 445 aa13.74□□□□□ -0.21
PRPF40B-202ENST00000380281 SLC40A1Q9NP59 571 aa13.74□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms