RNA–Protein interactions for RNA: ENST00000380276.6

U2AF1-202, Transcript of U2 small nuclear RNA auxiliary factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene U2AF1, Length 940 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U2AF1-202ENST00000380276 MYH6P13533 1939 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 HIP1O00291 1037 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 SMC5Q8IY18 1101 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 CAGE1Q8TC20 777 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 AFAP1L1Q8TED9 768 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 ZSWIM5Q9P217 1185 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 MRVI1Q9Y6F6 885 aa26.94■■□□□ 1.9
U2AF1-202ENST00000380276 TLL1O43897 1013 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 BAIAP3O94812 1187 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 TFF2Q03403 129 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 DGKDQ16760 1214 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 LRRC8DQ7L1W4 858 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 C7orf31Q8N865 590 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 KRT23Q9C075 422 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 JMJD4Q9H9V9 463 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 MTCH2Q9Y6C9 303 aa26.93■■□□□ 1.9
U2AF1-202ENST00000380276 EPOPA6NHQ4 379 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 COL9A1P20849 921 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 TAP1Q03518 808 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 AAK1Q2M2I8 961 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 IFIT1BQ5T764 474 aaKnown RBP26.92■■□□□ 1.9
U2AF1-202ENST00000380276 KRT40Q6A162 431 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 ANKS1AQ92625 1134 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 ZBED2Q9BTP6 218 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 DSCC1Q9BVC3 393 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 MAF1Q9H063 256 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 CTNNA3Q9UI47 895 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 KIAA1217Q5T5P2 1943 aa26.92■■□□□ 1.9
U2AF1-202ENST00000380276 SORBS3O60504 671 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 ARHGEF15O94989 841 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 MYCLP12524 364 aaPredicted RBP26.91■■□□□ 1.9
U2AF1-202ENST00000380276 SELPP16109 830 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 PSEN2P49810 448 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 DHX37Q8IY37 1157 aaKnown RBP26.91■■□□□ 1.9
U2AF1-202ENST00000380276 KAT2BQ92831 832 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 NECAB3Q96P71 396 aaPredicted RBP26.91■■□□□ 1.9
U2AF1-202ENST00000380276 KATNAL1Q9BW62 490 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 OSBPL3Q9H4L5 887 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 PXMP2Q9NR77 195 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 HDAC6Q9UBN7 1215 aa26.91■■□□□ 1.9
U2AF1-202ENST00000380276 TRIP12Q14669 1992 aaPredicted RBP26.9■■□□□ 1.9
U2AF1-202ENST00000380276 EIF3JO75822 258 aaKnown RBP26.9■■□□□ 1.9
U2AF1-202ENST00000380276 NR3C2P08235 984 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 ZNF286BP0CG31 522 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 NUCB1Q02818 461 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 AAMPQ13685 434 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 TMCO2Q7Z6W1 182 aaPredicted RBP26.9■■□□□ 1.9
U2AF1-202ENST00000380276 SESTD1Q86VW0 696 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 AMNQ9BXJ7 453 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 CNNM2Q9H8M5 875 aa26.9■■□□□ 1.9
U2AF1-202ENST00000380276 DDX41Q9UJV9 622 aaKnown RBP26.9■■□□□ 1.9
U2AF1-202ENST00000380276 IGHDP01880 384 aa26.89■■□□□ 1.9
U2AF1-202ENST00000380276 KCNQ1P51787 676 aa26.89■■□□□ 1.9
U2AF1-202ENST00000380276 WDR5P61964 334 aaKnown RBP26.89■■□□□ 1.9
U2AF1-202ENST00000380276 MFSD10Q14728 455 aa26.89■■□□□ 1.9
U2AF1-202ENST00000380276 STAG2Q8N3U4 1231 aa26.89■■□□□ 1.9
U2AF1-202ENST00000380276 DHX38Q92620 1227 aaKnown RBP26.89■■□□□ 1.9
U2AF1-202ENST00000380276 GTF2IRD1Q9UHL9 959 aa26.89■■□□□ 1.9
U2AF1-202ENST00000380276 TCF20Q9UGU0 1960 aaKnown RBP26.89■■□□□ 1.89
U2AF1-202ENST00000380276 TTC28Q96AY4 2481 aa26.88■■□□□ 1.89
U2AF1-202ENST00000380276 LAMC2Q13753 1193 aa26.88■■□□□ 1.89
U2AF1-202ENST00000380276 KIAA0753Q2KHM9 967 aa26.88■■□□□ 1.89
U2AF1-202ENST00000380276 CNKSR3Q6P9H4 555 aa26.88■■□□□ 1.89
U2AF1-202ENST00000380276 YTHDC1Q96MU7 727 aaKnown RBP26.88■■□□□ 1.89
U2AF1-202ENST00000380276 CTAGE1Q96RT6 745 aa26.88■■□□□ 1.89
U2AF1-202ENST00000380276 KLRF2D3W0D1 207 aa26.87■■□□□ 1.89
U2AF1-202ENST00000380276 CKBP12277 381 aa26.87■■□□□ 1.89
U2AF1-202ENST00000380276 HOMER1Q86YM7 354 aa26.87■■□□□ 1.89
U2AF1-202ENST00000380276 TET1Q8NFU7 2136 aa26.87■■□□□ 1.89
U2AF1-202ENST00000380276 CHD7Q9P2D1 2997 aa26.87■■□□□ 1.89
U2AF1-202ENST00000380276 DEFB103AP81534 67 aa26.86■■□□□ 1.89
U2AF1-202ENST00000380276 GRB10Q13322 594 aa26.86■■□□□ 1.89
U2AF1-202ENST00000380276 SPRED2Q7Z698 418 aa26.86■■□□□ 1.89
U2AF1-202ENST00000380276 PPTC7Q8NI37 304 aa26.86■■□□□ 1.89
U2AF1-202ENST00000380276 PTPRSQ13332 1948 aa26.85■■□□□ 1.89
U2AF1-202ENST00000380276 LCHNA4D1U4 455 aa26.85■■□□□ 1.89
U2AF1-202ENST00000380276 PARNO95453 639 aaKnown RBP26.85■■□□□ 1.89
U2AF1-202ENST00000380276 BMP1P13497 986 aa26.85■■□□□ 1.89
U2AF1-202ENST00000380276 HOXA13P31271 388 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-202ENST00000380276 FAM117BQ6P1L5 589 aa26.85■■□□□ 1.89
U2AF1-202ENST00000380276 EMID1Q96A84 441 aaPredicted RBP26.85■■□□□ 1.89
U2AF1-202ENST00000380276 MTUS1Q9ULD2 1270 aa26.85■■□□□ 1.89
U2AF1-202ENST00000380276 PCDHA1Q9Y5I3 950 aa26.85■■□□□ 1.89
U2AF1-202ENST00000380276 NBNO60934 754 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 F2P00734 622 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 POU3F3P20264 500 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-202ENST00000380276 HSD17B4P51659 736 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 PTK7Q13308 1070 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 GPNMBQ14956 572 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 GDPD5Q8WTR4 605 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 ZFP91Q96JP5 570 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-202ENST00000380276 SPATA33Q96N06 139 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 PDCD2LQ9BRP1 358 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 RAPGEFL1Q9UHV5 662 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 COL4A4P53420 1690 aaPredicted RBP26.84■■□□□ 1.89
U2AF1-202ENST00000380276 MYH7BA7E2Y1 1941 aa26.84■■□□□ 1.89
U2AF1-202ENST00000380276 OPLAHO14841 1288 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 ZBTB5O15062 677 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 GGPS1O95749 300 aa26.83■■□□□ 1.89
U2AF1-202ENST00000380276 ZNF200P98182 395 aaPredicted RBP26.83■■□□□ 1.89
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms