RNA–Protein interactions for RNA: ENST00000380071.7

RFC3-201, Transcript of replication factor C subunit 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RFC3, Length 2,402 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC3-201ENST00000380071 EHBP1Q8NDI1 1231 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 GBP3Q9H0R5 595 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 RIC8AQ9NPQ8 531 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 JADE2Q9NQC1 790 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 PCDHA13Q9Y5I0 950 aa13.51□□□□□ -0.25
RFC3-201ENST00000380071 PNMA6FA0A0J9YX94 578 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 TTLL1O95922 423 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 HNRNPH3P31942 346 aaKnown RBP13.5□□□□□ -0.25
RFC3-201ENST00000380071 EIF4A3P38919 411 aaKnown RBP13.5□□□□□ -0.25
RFC3-201ENST00000380071 EHHADHQ08426 723 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 ZNF543Q08ER8 600 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 SPA17Q15506 151 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 CCDC96Q2M329 555 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 TMEM119Q4V9L6 283 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 LRRC55Q6ZSA7 311 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 KCTD1Q719H9 257 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 RRAGAQ7L523 313 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 SECISBP2LQ93073 1101 aaKnown RBP13.5□□□□□ -0.25
RFC3-201ENST00000380071 HINFPQ9BQA5 517 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 MLXIPQ9HAP2 919 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 DDX25Q9UHL0 483 aaKnown RBP13.5□□□□□ -0.25
RFC3-201ENST00000380071 FAN1Q9Y2M0 1017 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 CAPN6Q9Y6Q1 641 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 PLIN4Q96Q06 1357 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 USP17L10C9JJH3 530 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 PHACTR2O75167 634 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 CLK2P49760 499 aaKnown RBP13.5□□□□□ -0.25
RFC3-201ENST00000380071 SCNN1DP51172 638 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 GPS2Q13227 327 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 RAB34Q9BZG1 259 aa13.5□□□□□ -0.25
RFC3-201ENST00000380071 LRRC53A6NM62 1247 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 EIF3JO75822 258 aaKnown RBP13.49□□□□□ -0.25
RFC3-201ENST00000380071 MOCS3O95396 460 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 TUBBP07437 444 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 LMAN1P49257 510 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 KIF11P52732 1056 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 DDR1Q08345 913 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 PPP4R3AQ6IN85 833 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 TXLNBQ8N3L3 684 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 MSL3Q8N5Y2 521 aaKnown RBP13.49□□□□□ -0.25
RFC3-201ENST00000380071 CCDC102AQ96A19 550 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 EXOC4Q96A65 974 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 DNAJC19Q96DA6 116 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 DRC1Q96MC2 740 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 GDAP1L1Q96MZ0 367 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 FGFBP2Q9BYJ0 223 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 IFIH1Q9BYX4 1025 aaKnown RBP13.49□□□□□ -0.25
RFC3-201ENST00000380071 USP40Q9NVE5 1235 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 TBC1D7Q9P0N9 293 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 SERPINB13Q9UIV8 391 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 HOXA10P31260 410 aaPredicted RBP13.49□□□□□ -0.25
RFC3-201ENST00000380071 SHMT1P34896 483 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 C2orf54Q08AI8 447 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 KCNMA1Q12791 1236 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 CAGE1Q8TC20 777 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 BAP1Q92560 729 aa13.49□□□□□ -0.25
RFC3-201ENST00000380071 ANO9A1A5B4 782 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 MPHOSPH10O00566 681 aaKnown RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 MARCH6O60337 910 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 ADRA2BP18089 450 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 LRRC63Q05C16 580 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 COASYQ13057 564 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 GSPT2Q8IYD1 628 aaKnown RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 TANGO6Q9C0B7 1094 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 DEF6Q9H4E7 631 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 SH2D4AQ9H788 454 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 SALL4Q9UJQ4 1053 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 PCDHA12Q9UN75 941 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 NPHP3-ACAD11A0A0J9YXS1 232 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 E9PMD0 336 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 FGFR1OPO95684 399 aaKnown RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 SSBP05455 408 aaKnown RBP eCLIP13.48□□□□□ -0.25
RFC3-201ENST00000380071 MYBL2P10244 700 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 IRX5P78411 483 aaPredicted RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 CACNB1Q02641 598 aaPredicted RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 CKAP4Q07065 602 aaKnown RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 DOK7Q18PE1 504 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 CCDC84Q86UT8 332 aaPredicted RBP13.48□□□□□ -0.25
RFC3-201ENST00000380071 CREG2Q8IUH2 290 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 ANKRD13CQ8N6S4 541 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 COG1Q8WTW3 980 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 CUL5Q93034 780 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 TSGA10Q9BZW7 698 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 PSTPIP2Q9H939 334 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 MYH10P35580 1976 aa13.48□□□□□ -0.25
RFC3-201ENST00000380071 FOCADQ5VW36 1801 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L15C9J2P7 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L13C9JLJ4 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L11C9JVI0 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L18D6R9N7 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L22D6RA61 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L17D6RBQ6 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L19D6RCP7 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L20D6RJB6 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 AKR1B10O60218 316 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 USO1O60763 962 aaKnown RBP13.47□□□□□ -0.25
RFC3-201ENST00000380071 GFPT1Q06210 699 aaPredicted RBP13.47□□□□□ -0.25
RFC3-201ENST00000380071 USP17L24Q0WX57 530 aa13.47□□□□□ -0.25
RFC3-201ENST00000380071 PSMD2Q13200 908 aa13.47□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 42.6 ms