RNA–Protein interactions for RNA: ENST00000379868.5

DDX58-201, Transcript of DExD/H-box helicase 58, humanhuman

TSL 5 BASIC

Gene DDX58, Length 4,089 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DDX58-201ENST00000379868 EXOC1Q9NV70 894 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 RNF216Q9NWF9 866 aaPredicted RBP6.31□□□□□ -1.4
DDX58-201ENST00000379868 ZNF215Q9UL58 517 aaPredicted RBP6.31□□□□□ -1.4
DDX58-201ENST00000379868 AFG3L2Q9Y4W6 797 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 TAF1P21675 1872 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 NID2Q14112 1375 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 A0A087WWV3 80 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 KBTBD13C9JR72 458 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 MEIS1O00470 390 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 ADCY3O60266 1144 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 RCAN1P53805 252 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 POLGP54098 1239 aaPredicted RBP6.31□□□□□ -1.4
DDX58-201ENST00000379868 RRP1BQ14684 758 aaKnown RBP6.31□□□□□ -1.4
DDX58-201ENST00000379868 MTERF2Q49AM1 385 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 OTUD6AQ7L8S5 288 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 FBXO16Q8IX29 292 aaPredicted RBP6.31□□□□□ -1.4
DDX58-201ENST00000379868 ATP6V0A1Q93050 837 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 IFT74Q96LB3 600 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 WDR11Q9BZH6 1224 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 MYPNQ86TC9 1320 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 CNTNAP1P78357 1384 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 UBR3Q6ZT12 1888 aa6.31□□□□□ -1.4
DDX58-201ENST00000379868 IPO5O00410 1097 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 CA12O43570 354 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TDP2O95551 362 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 ELNP15502 786 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 GCFC2P16383 781 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 TMOD1P28289 359 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 NEDD9Q14511 834 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TSR1Q2NL82 804 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 CYFIP1Q7L576 1253 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 IFNL1Q8IU54 200 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SCFD2Q8WU76 684 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 CHAMP1Q96JM3 812 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TRIM47Q96LD4 638 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 GNL3Q9BVP2 549 aaKnown RBP eCLIP6.3□□□□□ -1.4
DDX58-201ENST00000379868 FTOQ9C0B1 505 aaKnown RBP eCLIP6.3□□□□□ -1.4
DDX58-201ENST00000379868 FOXP1Q9H334 677 aaPredicted RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 NRBP2Q9NSY0 501 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 MTMR6Q9Y217 621 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 AKT3Q9Y243 479 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 POLR2DO15514 142 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 STRNO43815 780 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 USO1O60763 962 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 CSPG5O95196 566 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 NFX1Q12986 1120 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 TMEM132BQ14DG7 1078 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 CEP55Q53EZ4 464 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 MIS18BP1Q6P0N0 1132 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SV2BQ7L1I2 683 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 RASAL3Q86YV0 1011 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SLC7A3Q8WY07 619 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SMARCE1Q969G3 411 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 CEP170P1Q96L14 293 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 PYM1Q9BRP8 204 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 LRRC27Q9C0I9 530 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 PORCNQ9H237 461 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 MMRN2Q9H8L6 949 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 A1CFQ9NQ94 594 aaKnown RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 TLL2Q9Y6L7 1015 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 CNTNAP5Q8WYK1 1306 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 OFD1O75665 1012 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TPM3P06753 285 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 FAM102BQ5T8I3 360 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 CST9Q5W186 159 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 ZNF668Q96K58 619 aaPredicted RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 DACT1Q9NYF0 836 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TBC1D7Q9P0N9 293 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 LRRIQ4A6NIV6 560 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 KIF20AO95235 890 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TPM1P09493 284 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 XRCC6P12956 609 aaKnown RBP eCLIP6.3□□□□□ -1.4
DDX58-201ENST00000379868 JAG1P78504 1218 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TNFAIP2Q03169 654 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 TBC1D8BQ0IIM8 1120 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 MAP3K11Q16584 847 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 FAM110CQ1W6H9 321 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 HERC4Q5GLZ8 1057 aaPredicted RBP6.3□□□□□ -1.4
DDX58-201ENST00000379868 PRAMEF19Q5SWL8 479 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 ANKRD23Q86SG2 305 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 GAS2L3Q86XJ1 694 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 C7orf31Q8N865 590 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SOCS4Q8WXH5 440 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 MKL1Q969V6 931 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 GLT1D1Q96MS3 346 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 CLIC6Q96NY7 704 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SH2D3AQ9BRG2 576 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 SLC38A10Q9HBR0 1119 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 RIC8AQ9NPQ8 531 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 KIAA1024Q9UPX6 916 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 PCDHB6Q9Y5E3 794 aa6.3□□□□□ -1.4
DDX58-201ENST00000379868 MYH6P13533 1939 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 SIPA1L1O43166 1804 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 GPR25O00155 361 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 TLR2O60603 784 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 MAP2K2P36507 400 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 SMTNP53814 917 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 MUM1L1Q5H9M0 696 aa6.29□□□□□ -1.4
DDX58-201ENST00000379868 SPOUT1Q5T280 376 aaKnown RBP6.29□□□□□ -1.4
DDX58-201ENST00000379868 PPP1R18Q6NYC8 613 aa6.29□□□□□ -1.4
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms