RNA–Protein interactions for RNA: ENST00000378815.10

RAB3IP-204, Transcript of RAB3A interacting protein, humanhuman

TSL 2 BASIC

Gene RAB3IP, Length 2,386 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAB3IP-204ENST00000378815 FZD1Q9UP38 647 aa17.27■□□□□ 0.36
RAB3IP-204ENST00000378815 IGLV3-22A0A075B6J6 115 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 YBX3P16989 372 aaKnown RBP eCLIP17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 LRMPQ12912 555 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 PAK1Q13153 545 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 MCM6Q14566 821 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 HSP90AA4PQ58FG1 418 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 KCNK18Q7Z418 384 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 ADSSL1Q8N142 457 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 KIAA1524Q8TCG1 905 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 RPAP3Q9H6T3 665 aaPredicted RBP17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 PPP1R9AQ9ULJ8 1098 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 PYCARDQ9ULZ3 195 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 KDM3AQ9Y4C1 1321 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 MSH4O15457 936 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 FLOT1O75955 427 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 HSD17B4P51659 736 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 SUPT20HL1Q3ZLR7 823 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 CNNM4Q6P4Q7 775 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 LRRC8AQ8IWT6 810 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 UIMC1Q96RL1 719 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 NT5C3AQ9H0P0 336 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 ADARB2Q9NS39 739 aaKnown RBP17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 INTS13Q9NVM9 706 aa17.26■□□□□ 0.35
RAB3IP-204ENST00000378815 MYMKA6NI61 221 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 CDK11BP21127 795 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 CCT6AP40227 531 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 GSDMDP57764 484 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 ASIC1P78348 528 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 GHRHRQ02643 423 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 NOL9Q5SY16 702 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 TMC6Q7Z403 805 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 CYP2W1Q8TAV3 490 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 NELFBQ8WX92 580 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 CLEC4DQ8WXI8 215 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 ZNF76P36508 570 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 STAT3P40763 770 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 DHX8Q14562 1220 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 ARID5BQ14865 1188 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 CCDC47Q96A33 483 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 C12orf42Q96LP6 360 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 GTPBP4Q9BZE4 634 aaKnown RBP17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 EHMT1Q9H9B1 1298 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 ZHX2Q9Y6X8 837 aa17.25■□□□□ 0.35
RAB3IP-204ENST00000378815 APTXQ7Z2E3 356 aaKnown RBP17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 VSTM4Q8IW00 320 aa17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 LRRC27Q9C0I9 530 aa17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 EXOC1Q9NV70 894 aa17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 MAPK8IP1Q9UQF2 711 aa17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 PDE4DQ08499 809 aa17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 RAVER2Q9HCJ3 691 aaKnown RBP17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 VAV3Q9UKW4 847 aa17.24■□□□□ 0.35
RAB3IP-204ENST00000378815 PVALEFA0A1B0GWK0 134 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 C19orf81C9J6K1 198 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 NFIBO00712 420 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 FDX1P10109 184 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 DDX55Q8NHQ9 600 aaKnown RBP eCLIP17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 PNMA2Q9UL42 364 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 STIM1Q13586 685 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 COBLL1Q53SF7 1204 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 C9orf131Q5VYM1 1079 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 HAUS3Q68CZ6 603 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 UNC13DQ70J99 1090 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 MCF2L2Q86YR7 1114 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 CPXCR1Q8N123 301 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 SPTLC3Q9NUV7 552 aa17.23■□□□□ 0.35
RAB3IP-204ENST00000378815 RPTORQ8N122 1335 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 A0A1B0GTH6 734 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 COBLO75128 1261 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 ZBED4O75132 1171 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 MED24O75448 989 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 USP2O75604 605 aaPredicted RBP17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 STK4Q13043 487 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 CEP55Q53EZ4 464 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 KIAA1024Q9UPX6 916 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 STK24Q9Y6E0 443 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 POTEB3A0JP26 581 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 POTECB2RU33 542 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 VWA5AO00534 786 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 PSMA7O14818 248 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 ALAS1P13196 640 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 HMGCS2P54868 508 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 NOLC1Q14978 699 aaKnown RBP eCLIP17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 NR1I3Q14994 352 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 TPD52L1Q16890 204 aaPredicted RBP17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 POTEBQ6S5H4 581 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 C17orf53Q8N3J3 647 aaPredicted RBP17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 ERMNQ8TAM6 284 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 DDX12PQ92771 950 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 DHTKD1Q96HY7 919 aaPredicted RBP17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 MAP3K20Q9NYL2 800 aaKnown RBP17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 COL20A1Q9P218 1284 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 RABGAP1Q9Y3P9 1069 aa17.22■□□□□ 0.35
RAB3IP-204ENST00000378815 FCER1AP12319 257 aa17.21■□□□□ 0.35
RAB3IP-204ENST00000378815 RPA1P27694 616 aa17.21■□□□□ 0.35
RAB3IP-204ENST00000378815 PPP1R2P41236 205 aa17.21■□□□□ 0.35
RAB3IP-204ENST00000378815 PMS1P54277 932 aaKnown RBP17.21■□□□□ 0.35
RAB3IP-204ENST00000378815 UBXN2AP68543 259 aa17.21■□□□□ 0.35
RAB3IP-204ENST00000378815 MUM1L1Q5H9M0 696 aa17.21■□□□□ 0.35
RAB3IP-204ENST00000378815 NCAPH2Q6IBW4 605 aa17.21■□□□□ 0.35
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms