RNA–Protein interactions for RNA: ENST00000378725.3

SSU72-203, Transcript of SSU72 homolog, RNA polymerase II CTD phosphatase, humanhuman

TSL 2

Gene SSU72, Length 619 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSU72-203ENST00000378725 C11orf97A0A1B0GVM6 126 aaPredicted RBP21.44■■□□□ 1.02
SSU72-203ENST00000378725 RGS20O76081 388 aa21.44■■□□□ 1.02
SSU72-203ENST00000378725 ADCYAP1R1P41586 468 aa21.44■■□□□ 1.02
SSU72-203ENST00000378725 K7ELQ4 463 aaPredicted RBP21.43■■□□□ 1.02
SSU72-203ENST00000378725 ADCY6O43306 1168 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 DUSP11O75319 330 aaKnown RBP21.43■■□□□ 1.02
SSU72-203ENST00000378725 TFRCP02786 760 aaKnown RBP21.43■■□□□ 1.02
SSU72-203ENST00000378725 RARBP10826 455 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 SMPD1P17405 629 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 SREBF1P36956 1147 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 TNFAIP2Q03169 654 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 RASGRP4Q8TDF6 673 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 SCFD2Q8WU76 684 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 CRYGNQ8WXF5 182 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 PGBD1Q96JS3 809 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 WDR11Q9BZH6 1224 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 GNEQ9Y223 722 aaKnown RBP21.43■■□□□ 1.02
SSU72-203ENST00000378725 Q9Y3F1 56 aa21.43■■□□□ 1.02
SSU72-203ENST00000378725 ZSCAN21Q9Y5A6 473 aaPredicted RBP21.43■■□□□ 1.02
SSU72-203ENST00000378725 EN2P19622 333 aaPredicted RBP21.42■■□□□ 1.02
SSU72-203ENST00000378725 DUSP28Q4G0W2 176 aa21.42■■□□□ 1.02
SSU72-203ENST00000378725 ANO1Q5XXA6 986 aa21.42■■□□□ 1.02
SSU72-203ENST00000378725 KRT40Q6A162 431 aa21.42■■□□□ 1.02
SSU72-203ENST00000378725 CCDC62Q6P9F0 684 aa21.42■■□□□ 1.02
SSU72-203ENST00000378725 SEPT14Q6ZU15 432 aa21.42■■□□□ 1.02
SSU72-203ENST00000378725 FAM184AQ8NB25 1140 aa21.42■■□□□ 1.02
SSU72-203ENST00000378725 INPP4AQ96PE3 977 aaPredicted RBP21.42■■□□□ 1.02
SSU72-203ENST00000378725 LRRC37A2A6NM11 1700 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 MMP1P03956 469 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 CYP3A4P08684 503 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 ICAM3P32942 547 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 SOX10P56693 466 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 NKX3-2P78367 333 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 TRIM29Q14134 588 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 TTLL4Q14679 1199 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 TMEM63BQ5T3F8 832 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 KCNV1Q6PIU1 500 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 ZFP91Q96JP5 570 aaPredicted RBP21.41■■□□□ 1.02
SSU72-203ENST00000378725 RTEL1Q9NZ71 1219 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 UBIAD1Q9Y5Z9 338 aa21.41■■□□□ 1.02
SSU72-203ENST00000378725 MCM3APO60318 1980 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 NKRFO15226 690 aaKnown RBP eCLIP21.4■■□□□ 1.023e-6■■■■□ 24.3
SSU72-203ENST00000378725 ARIH2O95376 493 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 TGFB3P10600 412 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 ARHGAP4P98171 946 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 ANKLE1Q8NAG6 615 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 FBXO18Q8NFZ0 1043 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 OXER1Q8TDS5 423 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 LENG1Q96BZ8 264 aaPredicted RBP21.4■■□□□ 1.02
SSU72-203ENST00000378725 INTS4Q96HW7 963 aaKnown RBP21.4■■□□□ 1.02
SSU72-203ENST00000378725 C8orf76Q96K31 380 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 UPF3AQ9H1J1 476 aaKnown RBP21.4■■□□□ 1.02
SSU72-203ENST00000378725 XPNPEP3Q9NQH7 507 aa21.4■■□□□ 1.02
SSU72-203ENST00000378725 DDX41Q9UJV9 622 aaKnown RBP21.4■■□□□ 1.02
SSU72-203ENST00000378725 SPATA31C2B4DYI2 1134 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 EDIL3O43854 480 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 TXNP10599 105 aaKnown RBP21.39■■□□□ 1.01
SSU72-203ENST00000378725 ITGB5P18084 799 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 GJB2P29033 226 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 KRT2P35908 639 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 MNX1P50219 401 aaPredicted RBP21.39■■□□□ 1.01
SSU72-203ENST00000378725 GJA9P57773 515 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 GNPTABQ3T906 1256 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 ARRDC4Q8NCT1 418 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 TNFRSF25Q93038 417 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 JADE2Q9NQC1 790 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 SMC3Q9UQE7 1217 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 KIF3AQ9Y496 699 aa21.39■■□□□ 1.01
SSU72-203ENST00000378725 MAFGO15525 162 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 ADAMTS4O75173 837 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 USP11P51784 963 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 LY6KQ17RY6 165 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 KRT25Q7Z3Z0 450 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 NLRX1Q86UT6 975 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 HSCBQ8IWL3 235 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 KLHDC9Q8NEP7 349 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 GPRASP2Q96D09 838 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 MXRA8Q9BRK3 442 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 BRMS1Q9HCU9 246 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 MRVI1Q9Y6F6 885 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 CENPFP49454 3210 aa21.38■■□□□ 1.01
SSU72-203ENST00000378725 SYNRGQ9UMZ2 1314 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 BTBD18B2RXH4 712 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 CTAGE5O15320 804 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 FIBPO43427 364 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 PGK1P00558 417 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 CIITAP33076 1130 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 FOSBP53539 338 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 SEMA3FQ13275 785 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 LRRC41Q15345 812 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 CEP55Q53EZ4 464 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 GJC2Q5T442 439 aaPredicted RBP21.37■■□□□ 1.01
SSU72-203ENST00000378725 NIPA1Q7RTP0 329 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 TBCKQ8TEA7 893 aa21.37■■□□□ 1.01
SSU72-203ENST00000378725 MEIS1O00470 390 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 DYNC1LI2O43237 492 aaPredicted RBP21.36■■□□□ 1.01
SSU72-203ENST00000378725 PTGS1P23219 599 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 CST5P28325 142 aaPredicted RBP21.36■■□□□ 1.01
SSU72-203ENST00000378725 SP2Q02086 613 aa21.36■■□□□ 1.01
SSU72-203ENST00000378725 GUCY1B3Q02153 619 aa21.36■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms