RNA–Protein interactions for RNA: ENST00000378572.7

PRPF18-202, Transcript of pre-mRNA processing factor 18, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene PRPF18, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF18-202ENST00000378572 PPP2R2DQ66LE6 453 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 FBXO11Q86XK2 927 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 MICALL1Q8N3F8 863 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 JAKMIP1Q96N16 626 aaKnown RBP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 CNNM2Q9H8M5 875 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 MRPL11Q9Y3B7 192 aaKnown RBP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 GBF1Q92538 1859 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 HMGB1P09429 215 aaKnown RBP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 ACTN1P12814 892 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 NEK4P51957 841 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 CCDC85BQ15834 202 aaPredicted RBP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 ARHGEF16Q5VV41 709 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 NSUN6Q8TEA1 469 aaKnown RBP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 NEK1Q96PY6 1258 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 RMDN3Q96TC7 470 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 FTOQ9C0B1 505 aaKnown RBP eCLIP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 YBX2Q9Y2T7 364 aaKnown RBP15.91■□□□□ 0.14
PRPF18-202ENST00000378572 TAF6LQ9Y6J9 622 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 MYH6P13533 1939 aa15.91■□□□□ 0.14
PRPF18-202ENST00000378572 E7EWF7 191 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 ARIH2O95376 493 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 PFKMP08237 780 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 ATP2A2P16615 1042 aaKnown RBP15.9■□□□□ 0.14
PRPF18-202ENST00000378572 EIF2AK2P19525 551 aaKnown RBP15.9■□□□□ 0.14
PRPF18-202ENST00000378572 CASTP20810 708 aaKnown RBP15.9■□□□□ 0.14
PRPF18-202ENST00000378572 MCM2P49736 904 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 BLOC1S2Q6QNY1 142 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 RUFY3Q7L099 469 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 RGS22Q8NE09 1264 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 SYTL5Q8TDW5 730 aaPredicted RBP15.9■□□□□ 0.14
PRPF18-202ENST00000378572 SYMPKQ92797 1274 aaKnown RBP15.9■□□□□ 0.14
PRPF18-202ENST00000378572 TAAR1Q96RJ0 339 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 ZSWIM5Q9P217 1185 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 CYP46A1Q9Y6A2 500 aa15.9■□□□□ 0.14
PRPF18-202ENST00000378572 A6NJR5 290 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 CFBP00751 764 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 GH1P01241 217 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 TRDNQ13061 729 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 BFSP2Q13515 415 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 STXBP2Q15833 593 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 LY6KQ17RY6 165 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 NFRKBQ6P4R8 1299 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 STOX1Q6ZVD7 989 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 HSCBQ8IWL3 235 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 AFG1LQ8WV93 481 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 TBC1D5Q92609 795 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 PRUNE2Q8WUY3 3088 aa15.89■□□□□ 0.13
PRPF18-202ENST00000378572 CCDC155Q8N6L0 562 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 UPF3BQ9BZI7 483 aaKnown RBP15.88■□□□□ 0.13
PRPF18-202ENST00000378572 PRDM6Q9NQX0 595 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 COL20A1Q9P218 1284 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 MRVI1Q9Y6F6 885 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 MMP3P08254 477 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 MYOGP15173 224 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 RPS6KB1P23443 525 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 PTGISQ16647 500 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 TJAP1Q5JTD0 557 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 HOMER1Q86YM7 354 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 ANKS1AQ92625 1134 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 AMNQ9BXJ7 453 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 JMJD4Q9H9V9 463 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 SCN10AQ9Y5Y9 1956 aa15.88■□□□□ 0.13
PRPF18-202ENST00000378572 SCN5AQ14524 2016 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 TANC1Q9C0D5 1861 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 MYCLP12524 364 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-202ENST00000378572 RFC2P35250 354 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 PTPN11Q06124 597 aaPredicted RBP15.87■□□□□ 0.13
PRPF18-202ENST00000378572 NCOA7Q8NI08 942 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 IWS1Q96ST2 819 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 THEGQ9P2T0 379 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 PCDHA11Q9Y5I1 949 aa15.87■□□□□ 0.13
PRPF18-202ENST00000378572 MYO9BQ13459 2157 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 ERICH2A1L162 156 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 SORBS3O60504 671 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 CD2BP2O95400 341 aaKnown RBP15.86■□□□□ 0.13
PRPF18-202ENST00000378572 ARHGAP1Q07960 439 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 TMEM67Q5HYA8 995 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 DHX32Q7L7V1 743 aaKnown RBP15.86■□□□□ 0.13
PRPF18-202ENST00000378572 STAG2Q8N3U4 1231 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 ALG1Q9BT22 464 aa15.86■□□□□ 0.13
PRPF18-202ENST00000378572 KLRF2D3W0D1 207 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 K7ELQ4 463 aaPredicted RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 PITPNM1O00562 1244 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 ADGRE1Q14246 886 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 SKIV2LQ15477 1246 aaKnown RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 DGKDQ16760 1214 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 CCDC62Q6P9F0 684 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 RALYLQ86SE5 291 aaKnown RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 MB21D2Q8IYB1 491 aaPredicted RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 FBXL16Q8N461 479 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 C7orf31Q8N865 590 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 SLC9A7Q96T83 725 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 PXMP2Q9NR77 195 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 PDRG1Q9NUG6 133 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 CA3P07451 260 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 IQCF3P0C7M6 154 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 ZNF286BP0CG31 522 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 KCNJ6P48051 423 aa15.85■□□□□ 0.13
PRPF18-202ENST00000378572 EXOSC10Q01780 885 aaKnown RBP15.85■□□□□ 0.13
PRPF18-202ENST00000378572 CYB5R4Q7L1T6 521 aa15.85■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 22.4 ms