RNA–Protein interactions for RNA: ENST00000378387.3

ARHGEF39-201, Transcript of Rho guanine nucleotide exchange factor 39, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ARHGEF39, Length 3,769 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF39-201ENST00000378387 TCIRG1Q13488 830 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 PDCD2Q16342 344 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 IFIT1BQ5T764 474 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 TCERG1LQ5VWI1 586 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 MIS18BP1Q6P0N0 1132 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 SEPT14Q6ZU15 432 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 PEX26Q7Z412 305 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 CRACR2BQ8N4Y2 399 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 NAF1Q96HR8 494 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF496Q96IT1 587 aaPredicted RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 UIMC1Q96RL1 719 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 CELF4Q9BZC1 486 aaKnown RBP11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 TSKSQ9UJT2 592 aa11.54□□□□□ -0.56
ARHGEF39-201ENST00000378387 XDHP47989 1333 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 SART1O43290 800 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 XRCC4Q13426 336 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 GRIPAP1Q4V328 841 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 TLR10Q9BXR5 811 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 AZI2Q9H6S1 392 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 LY9Q9HBG7 655 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 TRIM33Q9UPN9 1127 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 SPDYE3A6NKU9 549 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 FGFR1OPO95684 399 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 NQO1P15559 274 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 ATP4AP20648 1035 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF844Q08AG5 666 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 SLMAPQ14BN4 828 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 ZNF790Q6PG37 636 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 SETD1BQ9UPS6 1966 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 DLG5Q8TDM6 1919 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 TRAF5O00463 557 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 PRKAB2O43741 272 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 PFDN1O60925 122 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 CCND1P24385 295 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 SETDB1Q15047 1291 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 HLFQ16534 295 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 EARS2Q5JPH6 523 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 SYCP3Q8IZU3 236 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 MRRFQ96E11 262 aaKnown RBP11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 TMEM165Q9HC07 324 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 TBC1D7Q9P0N9 293 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 ARHGAP20Q9P2F6 1191 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 KLHL14Q9P2G3 628 aa11.53□□□□□ -0.56
ARHGEF39-201ENST00000378387 MGRN1O60291 552 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 MKRN4PQ13434 485 aaPredicted RBP11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 CUL3Q13618 768 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 SFMBT2Q5VUG0 894 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 TATDN2Q93075 761 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 KDM4CQ9H3R0 1056 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 PICK1Q9NRD5 415 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 FGFR1OP2Q9NVK5 253 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 INTUQ9ULD6 942 aa11.52□□□□□ -0.56
ARHGEF39-201ENST00000378387 GSTTP1A0A1W2PQM5 241 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 PRPHP41219 470 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 AMOTQ4VCS5 1084 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 FAM89AQ96GI7 184 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 FMO2Q99518 471 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 AGLP35573 1532 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 CFAP73A6NFT4 308 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 TMEM110-MUSTN1A8MSY1 372 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 TTI1O43156 1089 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 SHBGP04278 402 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 ZNF131P52739 623 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 LRRC41Q15345 812 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 ZRSR2Q15696 482 aaKnown RBP11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 AKNAD1Q5T1N1 836 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 DZIP3Q86Y13 1208 aaKnown RBP11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 CCT6BQ92526 530 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 P2RX5Q93086 422 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 PYM1Q9BRP8 204 aaKnown RBP11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 CNNM2Q9H8M5 875 aa11.52□□□□□ -0.57
ARHGEF39-201ENST00000378387 A0A1W2PRG0 241 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 DPPA5A6NC42 116 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ZNF263O14978 683 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 SRGNP10124 158 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 COPB2P35606 906 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 MSH2P43246 934 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ERVK-9P63128 1117 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 DBN1Q16643 649 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ANKRD40Q6AI12 368 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 CCDC84Q86UT8 332 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ZC3H18Q86VM9 953 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 P3H4Q92791 437 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ZNF570Q96NI8 536 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 TRIM51Q9BSJ1 452 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 NDST4Q9H3R1 872 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 CNOT10Q9H9A5 744 aaKnown RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ARPP21Q9UBL0 812 aaPredicted RBP11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 TBK1Q9UHD2 729 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 AMOTL2Q9Y2J4 779 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 SNX24Q9Y343 169 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 C2CD2Q9Y426 696 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 FAM237AA0A1B0GTK4 181 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 A0A1W2PQC6 194 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 TCP11X1B4DZS4 312 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 FCER1AP12319 257 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 FERP16591 822 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 KLRC1P26715 233 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 C6orf89Q6UWU4 347 aa11.51□□□□□ -0.57
ARHGEF39-201ENST00000378387 ANKLE2Q86XL3 938 aa11.51□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.7 ms