RNA–Protein interactions for RNA: ENST00000378244.6

DEPDC4-202, Transcript of DEP domain containing 4, humanhuman

TSL 2

Gene DEPDC4, Length 2,337 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC4-202ENST00000378244 SEPT4O43236 478 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 HSP90AA1P07900 732 aaKnown RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 CLK2P49760 499 aaKnown RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 IRX5P78411 483 aaPredicted RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 NR5A1Q13285 461 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 TAPT1Q6NXT6 567 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 BICD2Q8TD16 824 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 UIMC1Q96RL1 719 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 GLT8D2Q9H1C3 349 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 PAK6Q9NQU5 681 aaPredicted RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 ZSCAN21Q9Y5A6 473 aaPredicted RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 EIF3JO75822 258 aaKnown RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 PGK1P00558 417 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 TFRCP02786 760 aaKnown RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 CCND2P30279 289 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 CYP2W1Q8TAV3 490 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 MORC4Q8TE76 937 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 SNX21Q969T3 373 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 WDR11Q9BZH6 1224 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 MAF1Q9H063 256 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 DDX20Q9UHI6 824 aaKnown RBP13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 FAM184BQ9ULE4 1060 aa13.4□□□□□ -0.26
DEPDC4-202ENST00000378244 BTBD18B2RXH4 712 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 RGS20O76081 388 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 FOSP01100 380 aaPredicted RBP13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 GJB1P08034 283 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 AKR1A1P14550 325 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 EN2P19622 333 aaPredicted RBP13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 TNFAIP2Q03169 654 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 VTA1Q9NP79 307 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 PKD2L1Q9P0L9 805 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 ARIH2O95376 493 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 MMP1P03956 469 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 TXNP10599 105 aaKnown RBP13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 RARBP10826 455 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 SMPD1P17405 629 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 AP3B2Q13367 1082 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 CUL4AQ13619 759 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 LY6KQ17RY6 165 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 LHX8Q68G74 356 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 DIS3L2Q8IYB7 885 aaKnown RBP13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 COPS5Q92905 334 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 MRVI1Q9Y6F6 885 aa13.39□□□□□ -0.27
DEPDC4-202ENST00000378244 FAM205CA6NFA0 338 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 SGPL1O95470 568 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 ZNF76P36508 570 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 ARHGAP4P98171 946 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 PCNX4Q63HM2 1172 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 PIK3AP1Q6ZUJ8 805 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 FBXO18Q8NFZ0 1043 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 TBCKQ8TEA7 893 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 CCDC194A0A1B0GVG4 234 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 DYNC1LI2O43237 492 aaPredicted RBP13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 ITGB5P18084 799 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 KRT2P35908 639 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 INF2Q27J81 1249 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 EARS2Q5JPH6 523 aaKnown RBP13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 SCFD2Q8WU76 684 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 EHMT1Q9H9B1 1298 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 BRMS1Q9HCU9 246 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 XPNPEP3Q9NQH7 507 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 NRBP1Q9UHY1 535 aa13.38□□□□□ -0.27
DEPDC4-202ENST00000378244 RBBP6Q7Z6E9 1792 aaKnown RBP13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 LOC102724159A0A0B4J2E5 919 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 C6orf222P0C671 652 aaPredicted RBP13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 SREBF1P36956 1147 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 GJA8P48165 433 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 GNL2Q13823 731 aaKnown RBP13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 PWP2Q15269 919 aaKnown RBP13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 LARP1BQ659C4 914 aaKnown RBP13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 MCTP1Q6DN14 999 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 GALNT17Q6IS24 598 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 BCAS3Q9H6U6 928 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 KIF3AQ9Y496 699 aa13.37□□□□□ -0.27
DEPDC4-202ENST00000378244 H3BQV1 296 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 M0R2N6 131 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 TTLL4Q14679 1199 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 SAFBQ15424 915 aaKnown RBP eCLIP13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 GNPTABQ3T906 1256 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 IFFO2Q5TF58 517 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 IQSEC1Q6DN90 963 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 DAGLBQ8NCG7 672 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 FRMPD4Q14CM0 1322 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 FAM86B1E9PN63 330 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 MSCO60682 206 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 FAM86B2P0C5J1 330 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 ATP2B1P20020 1258 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 BEX3Q00994 111 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 SP2Q02086 613 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 SP4Q02446 784 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 NONOQ15233 471 aaKnown RBP eCLIP13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 TLK2Q86UE8 772 aa13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 INPP4AQ96PE3 977 aaPredicted RBP13.36□□□□□ -0.27
DEPDC4-202ENST00000378244 MYADML2A6NDP7 307 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 MTMR1Q13613 665 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 LETM2Q2VYF4 491 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 DUSP28Q4G0W2 176 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 DDX41Q9UJV9 622 aaKnown RBP13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 SYNRGQ9UMZ2 1314 aa13.35□□□□□ -0.27
DEPDC4-202ENST00000378244 VPS37CA5D8V6 355 aaPredicted RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 38.5 ms