RNA–Protein interactions for RNA: ENST00000377885.6

RNF38-206, Transcript of ring finger protein 38, humanhuman

APPRIS P1 TSL 5 BASIC

Gene RNF38, Length 4,985 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF38-206ENST00000377885 TNS3Q68CZ2 1445 aa11□□□□□ -0.65
RNF38-206ENST00000377885 PMS1P54277 932 aaKnown RBP11□□□□□ -0.65
RNF38-206ENST00000377885 TROAPQ12815 778 aa11□□□□□ -0.65
RNF38-206ENST00000377885 LRIG3Q6UXM1 1119 aa11□□□□□ -0.65
RNF38-206ENST00000377885 TAOK3Q9H2K8 898 aa11□□□□□ -0.65
RNF38-206ENST00000377885 SSU72P8A0A1W2PR75 194 aa11□□□□□ -0.65
RNF38-206ENST00000377885 UBAP1LF5GYI3 381 aa11□□□□□ -0.65
RNF38-206ENST00000377885 KRIT1O00522 736 aa11□□□□□ -0.65
RNF38-206ENST00000377885 BUB1BO60566 1050 aaPredicted RBP11□□□□□ -0.65
RNF38-206ENST00000377885 CLSTN1O94985 981 aa11□□□□□ -0.65
RNF38-206ENST00000377885 PRPHP41219 470 aa11□□□□□ -0.65
RNF38-206ENST00000377885 CARSP49589 748 aaKnown RBP11□□□□□ -0.65
RNF38-206ENST00000377885 PPARDQ03181 441 aa11□□□□□ -0.65
RNF38-206ENST00000377885 CCDC65Q8IXS2 484 aa11□□□□□ -0.65
RNF38-206ENST00000377885 SYCE1Q8N0S2 351 aa11□□□□□ -0.65
RNF38-206ENST00000377885 PRPF38AQ8NAV1 312 aaKnown RBP11□□□□□ -0.65
RNF38-206ENST00000377885 TRIM9Q9C026 710 aa11□□□□□ -0.65
RNF38-206ENST00000377885 TAF1DQ9H5J8 278 aaPredicted RBP11□□□□□ -0.65
RNF38-206ENST00000377885 STK17AQ9UEE5 414 aa11□□□□□ -0.65
RNF38-206ENST00000377885 ASAP1Q9ULH1 1129 aa11□□□□□ -0.65
RNF38-206ENST00000377885 NIP7Q9Y221 180 aaKnown RBP eCLIP11□□□□□ -0.65
RNF38-206ENST00000377885 CEP83Q9Y592 693 aa11□□□□□ -0.65
RNF38-206ENST00000377885 ERVV-1B6SEH8 477 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 CALCRLQ16602 461 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 PDXDC1Q6P996 788 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 PEX26Q7Z412 305 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SH3GL2Q99962 352 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 CNOT10Q9H9A5 744 aaKnown RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 ARFGEF2Q9Y6D5 1785 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SNAP23O00161 211 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 PPP1R12BO60237 982 aaPredicted RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 BAG3O95817 575 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 PLEKP08567 350 aaPredicted RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 GYG1P46976 350 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 TTMPQ5BVD1 217 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 CROCCP2Q86T23 111 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 FMNL3Q8IVF7 1028 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 NKX2-3Q8TAU0 364 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 P3H4Q92791 437 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 MS4A14Q96JA4 679 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 ATP8A2Q9NTI2 1148 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SEPT11Q9NVA2 429 aaKnown RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 CEP72Q9P209 647 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 KIF1AQ12756 1690 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 RCCD1A6NED2 376 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 FLOT1O75955 427 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SLC1A4P43007 532 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SMTNP53814 917 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 TCERG1LQ5VWI1 586 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 YTHDF3Q7Z739 585 aaKnown RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 PARP9Q8IXQ6 854 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 TSEN2Q8NCE0 465 aaKnown RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 MYCBPAPQ8TBZ2 947 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SNX29Q8TEQ0 813 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 TBC1D5Q92609 795 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 NAP1L3Q99457 506 aaPredicted RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 C7orf25Q9BPX7 421 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 VCPKMTQ9H867 229 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 BAIAP2L1Q9UHR4 511 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 SMCO2A6NFE2 343 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 ACTN3Q08043 901 aaPredicted RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 TEX2Q8IWB9 1127 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 LARP4BQ92615 738 aaKnown RBP10.99□□□□□ -0.65
RNF38-206ENST00000377885 RAB17Q9H0T7 212 aa10.99□□□□□ -0.65
RNF38-206ENST00000377885 PGRMC1O00264 195 aaKnown RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 FCER1AP12319 257 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 C10orf76Q5T2E6 689 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 UNC13DQ70J99 1090 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 VGLL2Q8N8G2 317 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 C3orf20Q8ND61 904 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 KBTBD4Q9NVX7 518 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 COL4A3BPQ9Y5P4 624 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 TLDC2A0PJX2 215 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 ORC4O43929 436 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 FGFR2P21802 821 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 FKBP3Q00688 224 aaKnown RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 STK4Q13043 487 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 CCDC197Q8NCU1 140 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 EHD2Q9NZN4 543 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 PVALEFA0A1B0GWK0 134 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 CETN3O15182 167 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 SEC24CP53992 1094 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 ATP2B2Q01814 1243 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 PSMD2Q13200 908 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 PPP1R7Q15435 360 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 CDC37Q16543 378 aaPredicted RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 TXNRD1Q16881 649 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 TMED8Q6PL24 325 aaPredicted RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 USP54Q70EL1 1684 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 IRF2BP1Q8IU81 584 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 FAM114A2Q9NRY5 505 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 NOVA2Q9UNW9 492 aaKnown RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 C5P01031 1676 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 KIF4AO95239 1232 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 PPP2R2AP63151 447 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 HDLBPQ00341 1268 aaKnown RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 NBPF9Q3BBW0 867 aa10.98□□□□□ -0.65
RNF38-206ENST00000377885 DHX37Q8IY37 1157 aaKnown RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 REXO1Q8N1G1 1221 aaKnown RBP10.98□□□□□ -0.65
RNF38-206ENST00000377885 CYFIP2Q96F07 1278 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 13.4 ms