RNA–Protein interactions for RNA: ENST00000377298.8

CLSTN1-202, Transcript of calsyntenin 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CLSTN1, Length 5,221 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLSTN1-202ENST00000377298 BARGINQ6ZT62 677 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 EP400NLQ6ZTU2 488 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 AIFM3Q96NN9 605 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 RPS6KC1Q96S38 1066 aa19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 INO80BQ9C086 356 aaPredicted RBP19.59■□□□□ 0.73
CLSTN1-202ENST00000377298 NEDD4P46934 1319 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 PIK3CAP42336 1068 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 PTK2Q05397 1052 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 LONRF2Q1L5Z9 754 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 FAM186BQ8IYM0 893 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 CHAMP1Q96JM3 812 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 RAB17Q9H0T7 212 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 FAM81BQ96LP2 452 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 CRAMP1Q96RY5 1269 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 FBXO40Q9UH90 709 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 RSPH14Q9UHP6 348 aa19.58■□□□□ 0.73
CLSTN1-202ENST00000377298 TLR3O15455 904 aaKnown RBP19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 TBC1D10BQ4KMP7 808 aaPredicted RBP19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 RUFY4Q6ZNE9 571 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 CCDC89Q8N998 374 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 RAB20Q9NX57 234 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 PARP2Q9UGN5 583 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 RIMBP3CA6NJZ7 1639 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 RIMBP3BA6NNM3 1639 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 RIMBP3Q9UFD9 1639 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 EBAG9O00559 213 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 STAM2O75886 525 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 WHAMMP3Q1A5X7 153 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 CFAP157Q5JU67 520 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 RNF207Q6ZRF8 634 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 HYOU1Q9Y4L1 999 aa19.58■□□□□ 0.72
CLSTN1-202ENST00000377298 SF3B3Q15393 1217 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 FTOQ9C0B1 505 aaKnown RBP eCLIP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 HOXC10Q9NYD6 342 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 ZNF215Q9UL58 517 aaPredicted RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 ABT1Q9ULW3 272 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 SETD1BQ9UPS6 1966 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 CAPN9O14815 690 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 EIF2AK2P19525 551 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 TOB2Q14106 344 aaPredicted RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 PFKFB3Q16875 520 aaPredicted RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 FEM1BQ9UK73 627 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 USP17L5A8MUK1 530 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 MAN2A1Q16706 1144 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 CCDC121Q6ZUS5 278 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 APOBEC3FQ8IUX4 373 aaKnown RBP19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 ZNF34Q8IZ26 560 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 PARVGQ9HBI0 331 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 PPP2R2CQ9Y2T4 447 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 FRMPD1Q5SYB0 1578 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 PLA2G4BP0C869 781 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 ITIH3Q06033 890 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 SLFNL1Q499Z3 407 aa19.57■□□□□ 0.72
CLSTN1-202ENST00000377298 AFPP02771 609 aaKnown RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 NSFP46459 744 aaKnown RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 LGSNQ5TDP6 509 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 EPN1Q9Y6I3 576 aaPredicted RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 HOXA13P31271 388 aaPredicted RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 MTMR3Q13615 1198 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 SETDB1Q15047 1291 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 PPP1R18Q6NYC8 613 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 MAN1B1Q9UKM7 699 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 PNPLA7Q6ZV29 1317 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 MEIS1O00470 390 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 PLCG1P19174 1290 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 EN1Q05925 392 aaPredicted RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 ALCAMQ13740 583 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 DPCR1Q3MIW9 517 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 RCSD1Q6JBY9 416 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 MB21D2Q8IYB1 491 aaPredicted RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 ANKRD36BP1Q96IX9 119 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 CEP63Q96MT8 703 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 CD163L1Q9NR16 1453 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 TAOK1Q7L7X3 1001 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 LRRC8AQ8IWT6 810 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 ENAHQ8N8S7 591 aaPredicted RBP19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 DESI2Q9BSY9 194 aa19.56■□□□□ 0.72
CLSTN1-202ENST00000377298 ZNF277Q9NRM2 450 aaPredicted RBP19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 TCP1P17987 556 aaKnown RBP19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 PDXDC2PQ6P474 469 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 CYB5R4Q7L1T6 521 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 ATG9AQ7Z3C6 839 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 MARCH10Q8NA82 808 aaPredicted RBP19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 ODF2LQ9ULJ1 636 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 CCNE1P24864 410 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 CDC25AP30304 524 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 LRRC41Q15345 812 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 SESTD1Q86VW0 696 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 C2orf69Q8N8R5 385 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 EMILIN3Q9NT22 766 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 RWDD2AQ9UIY3 292 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 GSG1L2A8MUP6 293 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 LMNB1P20700 586 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 KRT81Q14533 505 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 CCDC6Q16204 474 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 WRNIP1Q96S55 665 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 NUB1Q9Y5A7 615 aa19.55■□□□□ 0.72
CLSTN1-202ENST00000377298 ZC3H13Q5T200 1668 aaKnown RBP19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 FAM83BQ5T0W9 1011 aa19.54■□□□□ 0.72
CLSTN1-202ENST00000377298 SND1Q7KZF4 910 aaKnown RBP eCLIP19.54■□□□□ 0.722e-7■■■□□ 15.6
Retrieved 100 of 20,778 RNA–protein pairs in 15.3 ms