RNA–Protein interactions for RNA: ENST00000376757.9

SSH3-203, Transcript of slingshot protein phosphatase 3, humanhuman

TSL 2 BASIC

Gene SSH3, Length 2,990 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSH3-203ENST00000376757 MYO1FO00160 1098 aa17.47■□□□□ 0.39
SSH3-203ENST00000376757 EIF3HO15372 352 aaKnown RBP eCLIP17.47■□□□□ 0.39
SSH3-203ENST00000376757 PPFIA1Q13136 1202 aa17.47■□□□□ 0.39
SSH3-203ENST00000376757 PARP10Q53GL7 1025 aa17.47■□□□□ 0.39
SSH3-203ENST00000376757 IQCEQ6IPM2 695 aa17.47■□□□□ 0.39
SSH3-203ENST00000376757 SRP68Q9UHB9 627 aaKnown RBP17.47■□□□□ 0.39
SSH3-203ENST00000376757 SHTN1A0MZ66 631 aa17.46■□□□□ 0.39
SSH3-203ENST00000376757 RAD21O60216 631 aa17.46■□□□□ 0.39
SSH3-203ENST00000376757 POLR2FP61218 127 aaKnown RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 KLHDC7AQ5VTJ3 777 aa17.46■□□□□ 0.39
SSH3-203ENST00000376757 TMED8Q6PL24 325 aaPredicted RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 DDX42Q86XP3 938 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSH3-203ENST00000376757 EFCC1Q9HA90 598 aa17.46■□□□□ 0.39
SSH3-203ENST00000376757 ZNF335Q9H4Z2 1342 aaPredicted RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 TULP1O00294 542 aaPredicted RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 NONOQ15233 471 aaKnown RBP eCLIP17.46■□□□□ 0.39
SSH3-203ENST00000376757 EFCAB13Q8IY85 973 aa17.46■□□□□ 0.39
SSH3-203ENST00000376757 RNPC3Q96LT9 517 aaKnown RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 BSDC1Q9NW68 430 aaPredicted RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 ARPP21Q9UBL0 812 aaPredicted RBP17.46■□□□□ 0.39
SSH3-203ENST00000376757 NPHP3-ACAD11A0A0J9YXS1 232 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 MAATS1Q7Z4T9 603 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 FAM114A1Q8IWE2 563 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 AMOTL1Q8IY63 956 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 FNBP4Q8N3X1 1017 aaPredicted RBP17.46■□□□□ 0.38
SSH3-203ENST00000376757 TBC1D5Q92609 795 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 CALML4Q96GE6 196 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 ERGIC2Q96RQ1 377 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 ATP8A2Q9NTI2 1148 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 BLOC1S4Q9NUP1 217 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 ADAMTS1Q9UHI8 967 aa17.46■□□□□ 0.38
SSH3-203ENST00000376757 TRAF5O00463 557 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 SLURP2P0DP57 97 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 KLRC1P26715 233 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 GRB10Q13322 594 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 RAPGEF1Q13905 1077 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 HLTFQ14527 1009 aaKnown RBP eCLIP17.45■□□□□ 0.38
SSH3-203ENST00000376757 SV2BQ7L1I2 683 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 MMGT1Q8N4V1 131 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 BCCIPQ9P287 314 aaKnown RBP eCLIP17.45■□□□□ 0.38
SSH3-203ENST00000376757 CAPN7Q9Y6W3 813 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 ZNF233A6NK53 670 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 GRM4Q14833 912 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 RNF187Q5TA31 235 aaPredicted RBP17.45■□□□□ 0.38
SSH3-203ENST00000376757 C12orf60Q5U649 245 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 TBC1D9BQ66K14 1250 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 CNNM4Q6P4Q7 775 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 NEK8Q86SG6 692 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 PLCH1Q4KWH8 1693 aa17.45■□□□□ 0.38
SSH3-203ENST00000376757 H0YHG0 523 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 SHOX2O60902 331 aaPredicted RBP17.44■□□□□ 0.38
SSH3-203ENST00000376757 TNNI2P48788 182 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 MNAT1P51948 309 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 RPS8P62241 208 aaKnown RBP17.44■□□□□ 0.38
SSH3-203ENST00000376757 ECM1Q16610 540 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 UBE2SQ16763 222 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 CCDC40Q4G0X9 1142 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 FAM133AQ8N9E0 248 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 TSGA10Q9BZW7 698 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 A0A087WUV0 522 aaPredicted RBP17.44■□□□□ 0.38
SSH3-203ENST00000376757 TLR2O60603 784 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 ATP2C2O75185 946 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 EPHB4P54760 987 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 CFAP58Q5T655 872 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 FBXO33Q7Z6M2 555 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 RETREG2Q8NC44 543 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 SNX29Q8TEQ0 813 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 BAP1Q92560 729 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 DDX12PQ92771 950 aa17.44■□□□□ 0.38
SSH3-203ENST00000376757 LSM14BQ9BX40 385 aaKnown RBP17.44■□□□□ 0.38
SSH3-203ENST00000376757 INPP5BP32019 993 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 KCNMA1Q12791 1236 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 SOGA3Q5TF21 947 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 ZSCAN29Q8IWY8 852 aaPredicted RBP17.43■□□□□ 0.38
SSH3-203ENST00000376757 LRRC47Q8N1G4 583 aaKnown RBP17.43■□□□□ 0.38
SSH3-203ENST00000376757 NOX5Q96PH1 765 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 PNMA5Q96PV4 448 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 AP1M1Q9BXS5 423 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 PPANQ9NQ55 473 aaKnown RBP17.43■□□□□ 0.38
SSH3-203ENST00000376757 ANKIB1Q9P2G1 1089 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 EP400Q96L91 3159 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 ANKRD36CQ5JPF3 1778 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 USP17L5A8MUK1 530 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 ACTN1P12814 892 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 CALCRLQ16602 461 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 PTF1AQ7RTS3 328 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 NOC3LQ8WTT2 800 aaKnown RBP17.43■□□□□ 0.38
SSH3-203ENST00000376757 LARP4BQ92615 738 aaKnown RBP17.43■□□□□ 0.38
SSH3-203ENST00000376757 C7orf25Q9BPX7 421 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 LRP5O75197 1615 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 MARCH6O60337 910 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 MAN2A1Q16706 1144 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 CENPPQ6IPU0 288 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 CASKIN2Q8WXE0 1202 aa17.43■□□□□ 0.38
SSH3-203ENST00000376757 MYH14Q7Z406 1995 aaKnown RBP17.42■□□□□ 0.38
SSH3-203ENST00000376757 A0A087X0T9 212 aa17.42■□□□□ 0.38
SSH3-203ENST00000376757 FAM228BP0C875 321 aa17.42■□□□□ 0.38
SSH3-203ENST00000376757 TCP1P17987 556 aaKnown RBP17.42■□□□□ 0.38
SSH3-203ENST00000376757 KIAA0753Q2KHM9 967 aa17.42■□□□□ 0.38
SSH3-203ENST00000376757 GPCPD1Q9NPB8 672 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms