RNA–Protein interactions for RNA: ENST00000376707.4

VSX1-201, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best) BASIC

Gene VSX1, Length 943 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-201ENST00000376707 MAP4K1Q92918 833 aa24.41■■□□□ 1.5
VSX1-201ENST00000376707 RIOX1Q9H6W3 641 aa24.41■■□□□ 1.5
VSX1-201ENST00000376707 DDX41Q9UJV9 622 aaKnown RBP24.41■■□□□ 1.5
VSX1-201ENST00000376707 SCN10AQ9Y5Y9 1956 aa24.41■■□□□ 1.5
VSX1-201ENST00000376707 CDH23Q9H251 3354 aa24.41■■□□□ 1.5
VSX1-201ENST00000376707 A0A0C4DFX4 3053 aa24.4■■□□□ 1.5
VSX1-201ENST00000376707 PITPNM1O00562 1244 aa24.4■■□□□ 1.5
VSX1-201ENST00000376707 HOXA13P31271 388 aaPredicted RBP24.4■■□□□ 1.5
VSX1-201ENST00000376707 TROAPQ12815 778 aa24.4■■□□□ 1.5
VSX1-201ENST00000376707 DGKDQ16760 1214 aa24.4■■□□□ 1.5
VSX1-201ENST00000376707 SLC35G1Q2M3R5 365 aa24.4■■□□□ 1.5
VSX1-201ENST00000376707 GAS2L1Q99501 681 aaPredicted RBP24.4■■□□□ 1.5
VSX1-201ENST00000376707 PDCD2LQ9BRP1 358 aa24.4■■□□□ 1.5
VSX1-201ENST00000376707 RBM8AQ9Y5S9 174 aaKnown RBP24.4■■□□□ 1.5
VSX1-201ENST00000376707 MYH6P13533 1939 aa24.39■■□□□ 1.5
VSX1-201ENST00000376707 GCOM1H8Y6P7 765 aaPredicted RBP24.39■■□□□ 1.49
VSX1-201ENST00000376707 POLR2MP0CAP2 368 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 RFC2P35250 354 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 BFSP2Q13515 415 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 LAMC2Q13753 1193 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 PTGISQ16647 500 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 DHX37Q8IY37 1157 aaKnown RBP24.39■■□□□ 1.49
VSX1-201ENST00000376707 EMID1Q96A84 441 aaPredicted RBP24.39■■□□□ 1.49
VSX1-201ENST00000376707 VWCEQ96DN2 955 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 NKX2-4Q9H2Z4 354 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 SLC28A3Q9HAS3 691 aa24.39■■□□□ 1.49
VSX1-201ENST00000376707 PNMA6FA0A0J9YX94 578 aa24.38■■□□□ 1.49
VSX1-201ENST00000376707 ACTN1P12814 892 aa24.38■■□□□ 1.49
VSX1-201ENST00000376707 ANTXR2P58335 489 aa24.38■■□□□ 1.49
VSX1-201ENST00000376707 MB21D2Q8IYB1 491 aaPredicted RBP24.38■■□□□ 1.49
VSX1-201ENST00000376707 CCDC155Q8N6L0 562 aa24.38■■□□□ 1.49
VSX1-201ENST00000376707 COL25A1Q9BXS0 654 aaPredicted RBP24.38■■□□□ 1.49
VSX1-201ENST00000376707 PRDM12Q9H4Q4 367 aa24.38■■□□□ 1.49
VSX1-201ENST00000376707 UNC80Q8N2C7 3258 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 CYTH3O43739 400 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 IQCF3P0C7M6 154 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 ATP2A2P16615 1042 aaKnown RBP24.37■■□□□ 1.49
VSX1-201ENST00000376707 PGM5Q15124 567 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 KCNV1Q6PIU1 500 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 FCHSD1Q86WN1 690 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 PPTC7Q8NI37 304 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 IGDCC4Q8TDY8 1250 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 KAT2BQ92831 832 aa24.37■■□□□ 1.49
VSX1-201ENST00000376707 YBX2Q9Y2T7 364 aaKnown RBP24.37■■□□□ 1.49
VSX1-201ENST00000376707 CCND2P30279 289 aa24.36■■□□□ 1.49
VSX1-201ENST00000376707 RABGGTBP53611 331 aa24.36■■□□□ 1.49
VSX1-201ENST00000376707 GDF6Q6KF10 455 aaPredicted RBP24.36■■□□□ 1.49
VSX1-201ENST00000376707 VSIG10LQ86VR7 867 aa24.36■■□□□ 1.49
VSX1-201ENST00000376707 SESTD1Q86VW0 696 aa24.36■■□□□ 1.49
VSX1-201ENST00000376707 PIBF1Q8WXW3 757 aa24.36■■□□□ 1.49
VSX1-201ENST00000376707 KATNAL1Q9BW62 490 aa24.36■■□□□ 1.49
VSX1-201ENST00000376707 FTOQ9C0B1 505 aaKnown RBP eCLIP24.36■■□□□ 1.49
VSX1-201ENST00000376707 RGS20O76081 388 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 CASC1Q6TDU7 716 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 CENPQQ7L2Z9 268 aaPredicted RBP24.35■■□□□ 1.49
VSX1-201ENST00000376707 C7orf31Q8N865 590 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 IL31RAQ8NI17 732 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 CTCFLQ8NI51 663 aaPredicted RBP24.35■■□□□ 1.49
VSX1-201ENST00000376707 CAGE1Q8TC20 777 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 ALG1Q9BT22 464 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 PCDHA11Q9Y5I1 949 aa24.35■■□□□ 1.49
VSX1-201ENST00000376707 KIAA1217Q5T5P2 1943 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 ZNF286BP0CG31 522 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 PSEN2P49810 448 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 ZNF654Q8IZM8 581 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 AFAP1L1Q8TED9 768 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 LY9Q9HBG7 655 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 GTF2IRD1Q9UHL9 959 aa24.34■■□□□ 1.49
VSX1-201ENST00000376707 EYSQ5T1H1 3165 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 PRC1O43663 620 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 SORBS3O60504 671 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 DDAH1O94760 285 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 GGPS1O95749 300 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 KIF5BP33176 963 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 MFSD10Q14728 455 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 CELF3Q5SZQ8 465 aaKnown RBP24.33■■□□□ 1.49
VSX1-201ENST00000376707 MYSM1Q5VVJ2 828 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 PPP2R2DQ66LE6 453 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 ZFP91Q96JP5 570 aaPredicted RBP24.33■■□□□ 1.49
VSX1-201ENST00000376707 SPATA33Q96N06 139 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 MAP3K14Q99558 947 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 MYL10Q9BUA6 226 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 HDAC6Q9UBN7 1215 aa24.33■■□□□ 1.49
VSX1-201ENST00000376707 PPFIA4O75335 1185 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 F2P00734 622 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 TGFB3P10600 412 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 MYOGP15173 224 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 KIAA0753Q2KHM9 967 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 NFXL1Q6ZNB6 911 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 USP38Q8NB14 1042 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 RRP36Q96EU6 259 aaKnown RBP24.32■■□□□ 1.48
VSX1-201ENST00000376707 CTAGE1Q96RT6 745 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 MTA3Q9BTC8 594 aa24.32■■□□□ 1.48
VSX1-201ENST00000376707 LSG1Q9H089 658 aaKnown RBP24.32■■□□□ 1.48
VSX1-201ENST00000376707 SELPP16109 830 aa24.31■■□□□ 1.48
VSX1-201ENST00000376707 UBA1P22314 1058 aaKnown RBP24.31■■□□□ 1.48
VSX1-201ENST00000376707 IGFBP4P22692 258 aa24.31■■□□□ 1.48
VSX1-201ENST00000376707 MCM5P33992 734 aa24.31■■□□□ 1.48
VSX1-201ENST00000376707 HSDL1Q3SXM5 330 aa24.31■■□□□ 1.48
VSX1-201ENST00000376707 BMP2KLQ5H9B9 411 aa24.31■■□□□ 1.48
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms