RNA–Protein interactions for RNA: ENST00000376610.6

HDAC6-202, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 736 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-202ENST00000376610 MRVI1Q9Y6F6 885 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 CHD9Q3L8U1 2897 aa21.5■■□□□ 1.03
HDAC6-202ENST00000376610 ERICH2A1L162 156 aa21.49■■□□□ 1.03
HDAC6-202ENST00000376610 NR3C2P08235 984 aa21.49■■□□□ 1.03
HDAC6-202ENST00000376610 STAG2Q8N3U4 1231 aa21.49■■□□□ 1.03
HDAC6-202ENST00000376610 KATNAL1Q9BW62 490 aa21.49■■□□□ 1.03
HDAC6-202ENST00000376610 TSPYL2Q9H2G4 693 aaPredicted RBP21.49■■□□□ 1.03
HDAC6-202ENST00000376610 MAP3K20Q9NYL2 800 aaKnown RBP21.49■■□□□ 1.03
HDAC6-202ENST00000376610 THEGQ9P2T0 379 aa21.49■■□□□ 1.03
HDAC6-202ENST00000376610 U3KPZ7 1027 aaPredicted RBP21.49■■□□□ 1.03
HDAC6-202ENST00000376610 TRIP12Q14669 1992 aaPredicted RBP21.48■■□□□ 1.03
HDAC6-202ENST00000376610 KIF28PB7ZC32 967 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 ZBTB5O15062 677 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 LAMC2Q13753 1193 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 ADGRE1Q14246 886 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 CCDC85BQ15834 202 aaPredicted RBP21.48■■□□□ 1.03
HDAC6-202ENST00000376610 TTC22Q5TAA0 569 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 C7orf31Q8N865 590 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 PHOSPHO2Q8TCD6 241 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 AFAP1L1Q8TED9 768 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 ATXN2LQ8WWM7 1075 aaKnown RBP21.48■■□□□ 1.03
HDAC6-202ENST00000376610 VWCEQ96DN2 955 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 DDX41Q9UJV9 622 aaKnown RBP21.48■■□□□ 1.03
HDAC6-202ENST00000376610 PCDHA1Q9Y5I3 950 aa21.48■■□□□ 1.03
HDAC6-202ENST00000376610 MYOGP15173 224 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 HSD17B4P51659 736 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 SART3Q15020 963 aaKnown RBP21.47■■□□□ 1.03
HDAC6-202ENST00000376610 SEC23AQ15436 765 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 KCNV1Q6PIU1 500 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 RALYLQ86SE5 291 aaKnown RBP21.47■■□□□ 1.03
HDAC6-202ENST00000376610 SESTD1Q86VW0 696 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 DHX37Q8IY37 1157 aaKnown RBP21.47■■□□□ 1.03
HDAC6-202ENST00000376610 SAMD3Q8N6K7 520 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 IL27Q8NEV9 243 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 EMID1Q96A84 441 aaPredicted RBP21.47■■□□□ 1.03
HDAC6-202ENST00000376610 MAD2L2Q9UI95 211 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 MYH7BA7E2Y1 1941 aa21.47■■□□□ 1.03
HDAC6-202ENST00000376610 NCOR1O75376 2440 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 IFIT3O14879 490 aaKnown RBP21.46■■□□□ 1.03
HDAC6-202ENST00000376610 BAIAP3O94812 1187 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 MYCLP12524 364 aaPredicted RBP21.46■■□□□ 1.03
HDAC6-202ENST00000376610 KCNJ6P48051 423 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 CYB5R4Q7L1T6 521 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 HOMER1Q86YM7 354 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 PPTC7Q8NI37 304 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 PRDM6Q9NQX0 595 aa21.46■■□□□ 1.03
HDAC6-202ENST00000376610 PALM3A6NDB9 673 aaPredicted RBP21.45■■□□□ 1.02
HDAC6-202ENST00000376610 PARNO95453 639 aaKnown RBP21.45■■□□□ 1.02
HDAC6-202ENST00000376610 CA3P07451 260 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 SELPP16109 830 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 GHRHRQ02643 423 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 GDF6Q6KF10 455 aaPredicted RBP21.45■■□□□ 1.02
HDAC6-202ENST00000376610 MICALL1Q8N3F8 863 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 KAT2BQ92831 832 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 IL25Q9H293 177 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 GTF2IRD1Q9UHL9 959 aa21.45■■□□□ 1.02
HDAC6-202ENST00000376610 TET1Q8NFU7 2136 aa21.44■■□□□ 1.02
HDAC6-202ENST00000376610 GTPBP6O43824 516 aaPredicted RBP21.44■■□□□ 1.02
HDAC6-202ENST00000376610 GSPT1P15170 499 aaKnown RBP21.44■■□□□ 1.02
HDAC6-202ENST00000376610 PSEN2P49810 448 aa21.44■■□□□ 1.02
HDAC6-202ENST00000376610 MRPS5P82675 430 aaKnown RBP21.44■■□□□ 1.02
HDAC6-202ENST00000376610 MTMR8Q96EF0 704 aa21.44■■□□□ 1.02
HDAC6-202ENST00000376610 PDCD2LQ9BRP1 358 aa21.44■■□□□ 1.02
HDAC6-202ENST00000376610 ALG1Q9BT22 464 aa21.44■■□□□ 1.02
HDAC6-202ENST00000376610 BAZ2BQ9UIF8 2168 aaKnown RBP21.44■■□□□ 1.02
HDAC6-202ENST00000376610 GCOM1H8Y6P7 765 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-202ENST00000376610 OPLAHO14841 1288 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 POLR2MP0CAP2 368 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 PDE4AP27815 886 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 CCND2P30279 289 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 HOXA13P31271 388 aaPredicted RBP21.43■■□□□ 1.02
HDAC6-202ENST00000376610 MFSD10Q14728 455 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 GRM4Q14833 912 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 WTAPQ15007 396 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 KIAA0753Q2KHM9 967 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 STOX1Q6ZVD7 989 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 LRRC8DQ7L1W4 858 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 HERC6Q8IVU3 1022 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 NCOA7Q8NI08 942 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 HDAC6Q9UBN7 1215 aa21.43■■□□□ 1.02
HDAC6-202ENST00000376610 PPP1R11O60927 126 aaPredicted RBP21.42■■□□□ 1.02
HDAC6-202ENST00000376610 CYP21A2P08686 494 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 ZNF286BP0CG31 522 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 PGM5Q15124 567 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 CATIPQ7Z7H3 387 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 SPATA33Q96N06 139 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 ASB2Q96Q27 587 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 PIGSQ96S52 555 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 CHD7Q9P2D1 2997 aa21.42■■□□□ 1.02
HDAC6-202ENST00000376610 TNFRSF10AO00220 468 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 TLL1O43897 1013 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 PPFIA4O75335 1185 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 GGPS1O95749 300 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 F2P00734 622 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 TGFB3P10600 412 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 CHMLP26374 656 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 VSIG10LQ86VR7 867 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 ZBED2Q9BTP6 218 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 RIOX1Q9H6W3 641 aa21.41■■□□□ 1.02
HDAC6-202ENST00000376610 SUPT16HQ9Y5B9 1047 aaKnown RBP21.41■■□□□ 1.02
Retrieved 100 of 20,778 RNA–protein pairs in 20.5 ms