RNA–Protein interactions for RNA: ENST00000376490.7

CLCN6-203, Transcript of chloride voltage-gated channel 6, humanhuman

TSL 1 (best)

Gene CLCN6, Length 963 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLCN6-203ENST00000376490 USP17L6PQ6QN14 398 aa16.46■□□□□ 0.23
CLCN6-203ENST00000376490 FAM217BQ9NTX9 383 aaPredicted RBP16.46■□□□□ 0.23
CLCN6-203ENST00000376490 RBM28Q9NW13 759 aaKnown RBP16.46■□□□□ 0.23
CLCN6-203ENST00000376490 DDX41Q9UJV9 622 aaKnown RBP16.46■□□□□ 0.23
CLCN6-203ENST00000376490 TRIP12Q14669 1992 aaPredicted RBP16.46■□□□□ 0.22
CLCN6-203ENST00000376490 A6NJR5 290 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 MEIS2O14770 477 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 KIAA0355O15063 1070 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 CASTP20810 708 aaKnown RBP16.45■□□□□ 0.22
CLCN6-203ENST00000376490 CDC27P30260 824 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 PURAQ00577 322 aaKnown RBP16.45■□□□□ 0.22
CLCN6-203ENST00000376490 FUT2Q10981 343 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 SLC43A3Q8NBI5 491 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 SMARCC2Q8TAQ2 1214 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 BRF1Q92994 677 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 POLR3EQ9NVU0 708 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 V9GY48 417 aaPredicted RBP16.45■□□□□ 0.22
CLCN6-203ENST00000376490 MROH7Q68CQ1 1323 aa16.45■□□□□ 0.22
CLCN6-203ENST00000376490 GOLGA8AA7E2F4 631 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 GOLGA8BA8MQT2 603 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 EPB41L2O43491 1005 aaKnown RBP16.44■□□□□ 0.22
CLCN6-203ENST00000376490 GH1P01241 217 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 RAG1P15918 1043 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 PSMA5P28066 241 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 CCND2P30279 289 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 ADD1P35611 737 aaKnown RBP16.44■□□□□ 0.22
CLCN6-203ENST00000376490 BRDTQ58F21 947 aaPredicted RBP16.44■□□□□ 0.22
CLCN6-203ENST00000376490 FAM126BQ8IXS8 530 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 TDHQ8IZJ6 230 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 AFG1LQ8WV93 481 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 GPKOWQ92917 476 aaPredicted RBP eCLIP16.44■□□□□ 0.22
CLCN6-203ENST00000376490 CUL5Q93034 780 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 PSTPIP2Q9H939 334 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 MRVI1Q9Y6F6 885 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 CNTNAP5Q8WYK1 1306 aa16.44■□□□□ 0.22
CLCN6-203ENST00000376490 PIK3CDO00329 1044 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 SOX1O00570 391 aaPredicted RBP16.43■□□□□ 0.22
CLCN6-203ENST00000376490 CD4P01730 458 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 MRPS9P82933 396 aaKnown RBP16.43■□□□□ 0.22
CLCN6-203ENST00000376490 ARHGAP1Q07960 439 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 HEATR3Q7Z4Q2 680 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 PPP1R13LQ8WUF5 828 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 MTG1Q9BT17 334 aaPredicted RBP16.43■□□□□ 0.22
CLCN6-203ENST00000376490 RTEL1Q9NZ71 1219 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 TBX21Q9UL17 535 aa16.43■□□□□ 0.22
CLCN6-203ENST00000376490 RANBP2P49792 3224 aaKnown RBP16.42■□□□□ 0.22
CLCN6-203ENST00000376490 TLR3O15455 904 aaKnown RBP16.42■□□□□ 0.22
CLCN6-203ENST00000376490 SORBS3O60504 671 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 KPNA6O60684 536 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 SP2Q02086 613 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 RUFY3Q7L099 469 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 DHX37Q8IY37 1157 aaKnown RBP16.42■□□□□ 0.22
CLCN6-203ENST00000376490 FBXL16Q8N461 479 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 AGXT2Q9BYV1 514 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 TRPV6Q9H1D0 765 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 ZSWIM6Q9HCJ5 1215 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 FRMPD4Q14CM0 1322 aa16.42■□□□□ 0.22
CLCN6-203ENST00000376490 TIMP1P01033 207 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 METAP2P50579 478 aaKnown RBP eCLIP16.41■□□□□ 0.22
CLCN6-203ENST00000376490 RCAN1P53805 252 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 SHHQ15465 462 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 UBE2SQ16763 222 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 NBPF20Q3BBV1 942 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 WWC2Q6AWC2 1192 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 LRCH3Q96II8 777 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 BCAS3Q9H6U6 928 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 KAT6AQ92794 2004 aa16.41■□□□□ 0.22
CLCN6-203ENST00000376490 SCN5AQ14524 2016 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 B4GALT4O60513 344 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 MMP3P08254 477 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 TGFB3P10600 412 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 EPHB4P54760 987 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 CHMP4BP1P59074 171 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 LAMC2Q13753 1193 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 TOB2Q14106 344 aaPredicted RBP16.4■□□□□ 0.22
CLCN6-203ENST00000376490 C9orf50Q5SZB4 431 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 MYSM1Q5VVJ2 828 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 TYW1BQ6NUM6 668 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 KCNV1Q6PIU1 500 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 LARP6Q9BRS8 491 aaKnown RBP16.4■□□□□ 0.22
CLCN6-203ENST00000376490 SEZ6LQ9BYH1 1024 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 PPP1R12CQ9BZL4 782 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 ALDH8A1Q9H2A2 487 aaPredicted RBP16.4■□□□□ 0.22
CLCN6-203ENST00000376490 CYP46A1Q9Y6A2 500 aa16.4■□□□□ 0.22
CLCN6-203ENST00000376490 CCDC196A0A1B0GTZ2 297 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 GGPS1O95749 300 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 PDIA3P30101 505 aaKnown RBP16.39■□□□□ 0.21
CLCN6-203ENST00000376490 CYP2C18P33260 490 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 NAPAP54920 295 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 CCT2P78371 535 aaKnown RBP16.39■□□□□ 0.21
CLCN6-203ENST00000376490 LRIT3Q3SXY7 679 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 FAM47CQ5HY64 1035 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 CELF3Q5SZQ8 465 aaKnown RBP16.39■□□□□ 0.21
CLCN6-203ENST00000376490 PCNX4Q63HM2 1172 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 EMID1Q96A84 441 aaPredicted RBP16.39■□□□□ 0.21
CLCN6-203ENST00000376490 INPP4AQ96PE3 977 aaPredicted RBP16.39■□□□□ 0.21
CLCN6-203ENST00000376490 UPF3BQ9BZI7 483 aaKnown RBP16.39■□□□□ 0.21
CLCN6-203ENST00000376490 TM6SF1Q9BZW5 370 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 PCDHA6Q9UN73 950 aa16.39■□□□□ 0.21
CLCN6-203ENST00000376490 PCDHA8Q9Y5H6 950 aa16.39■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 20.6 ms