RNA–Protein interactions for RNA: ENST00000375640.7

C6orf48-205, Transcript of chromosome 6 open reading frame 48, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C6orf48, Length 1,053 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C6orf48-205ENST00000375640 MTG1Q9BT17 334 aaPredicted RBP23.06■■□□□ 1.28
C6orf48-205ENST00000375640 TBX21Q9UL17 535 aa23.06■■□□□ 1.28
C6orf48-205ENST00000375640 RANBP2P49792 3224 aaKnown RBP23.06■■□□□ 1.28
C6orf48-205ENST00000375640 KLF18A0A0U1RQI7 1052 aa23.05■■□□□ 1.28
C6orf48-205ENST00000375640 CCND2P30279 289 aa23.05■■□□□ 1.28
C6orf48-205ENST00000375640 PSTPIP2Q9H939 334 aa23.05■■□□□ 1.28
C6orf48-205ENST00000375640 MRVI1Q9Y6F6 885 aa23.05■■□□□ 1.28
C6orf48-205ENST00000375640 TRIOBPQ9H2D6 2365 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 TIMP1P01033 207 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 CD4P01730 458 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 TGFB3P10600 412 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 PSMC6P62333 389 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 ARHGAP1Q07960 439 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 Q6ZUG5 572 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 SMARCC2Q8TAQ2 1214 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 EMID1Q96A84 441 aaPredicted RBP23.04■■□□□ 1.28
C6orf48-205ENST00000375640 USP26Q9BXU7 913 aa23.04■■□□□ 1.28
C6orf48-205ENST00000375640 MCM3APO60318 1980 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 MEIS2O14770 477 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 STAM2O75886 525 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 RGS20O76081 388 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 CPA1P15085 419 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 RPS6KB1P23443 525 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 LAMC2Q13753 1193 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 USP17L6PQ6QN14 398 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 AFG1LQ8WV93 481 aa23.03■■□□□ 1.28
C6orf48-205ENST00000375640 LCTP09848 1927 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 CCDC196A0A1B0GTZ2 297 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 hCG_1642624A0A1W2PR95 340 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 GOLGA8AA7E2F4 631 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 GOLGA8BA8MQT2 603 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 FUT2Q10981 343 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 XRRA1Q6P2D8 792 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 IL31RAQ8NI17 732 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 FAM217BQ9NTX9 383 aaPredicted RBP23.02■■□□□ 1.28
C6orf48-205ENST00000375640 V9GY48 417 aaPredicted RBP23.02■■□□□ 1.28
C6orf48-205ENST00000375640 FRMPD4Q14CM0 1322 aa23.02■■□□□ 1.28
C6orf48-205ENST00000375640 SOX1O00570 391 aaPredicted RBP23.01■■□□□ 1.27
C6orf48-205ENST00000375640 CASTP20810 708 aaKnown RBP23.01■■□□□ 1.27
C6orf48-205ENST00000375640 MFSD5Q6N075 450 aa23.01■■□□□ 1.27
C6orf48-205ENST00000375640 HEATR3Q7Z4Q2 680 aa23.01■■□□□ 1.27
C6orf48-205ENST00000375640 TEX2Q8IWB9 1127 aa23.01■■□□□ 1.27
C6orf48-205ENST00000375640 DHX37Q8IY37 1157 aaKnown RBP23.01■■□□□ 1.27
C6orf48-205ENST00000375640 BRF1Q92994 677 aa23.01■■□□□ 1.27
C6orf48-205ENST00000375640 AGXT2Q9BYV1 514 aa23.01■■□□□ 1.27
C6orf48-205ENST00000375640 DNAH12Q6ZR08 3092 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 MMP3P08254 477 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 SUPT20HL2P0C7V6 817 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 MRPS9P82933 396 aaKnown RBP23■■□□□ 1.27
C6orf48-205ENST00000375640 FPGSQ05932 587 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 APOBRQ0VD83 1088 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 GNPTABQ3T906 1256 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 GPR153Q6NV75 609 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 NFRKBQ6P4R8 1299 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 ALDH8A1Q9H2A2 487 aaPredicted RBP23■■□□□ 1.27
C6orf48-205ENST00000375640 NAP1L2Q9ULW6 460 aaPredicted RBP23■■□□□ 1.27
C6orf48-205ENST00000375640 CNTNAP5Q8WYK1 1306 aa23■■□□□ 1.27
C6orf48-205ENST00000375640 LRRC37A2A6NM11 1700 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 CDC27P30260 824 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 ICAM3P32942 547 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 METAP2P50579 478 aaKnown RBP eCLIP22.99■■□□□ 1.271e-9■■■□□ 14.6
C6orf48-205ENST00000375640 PTPN11Q06124 597 aaPredicted RBP22.99■■□□□ 1.27
C6orf48-205ENST00000375640 SHHQ15465 462 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 DGKDQ16760 1214 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 NBPF20Q3BBV1 942 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 CELF3Q5SZQ8 465 aaKnown RBP22.99■■□□□ 1.27
C6orf48-205ENST00000375640 MYSM1Q5VVJ2 828 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 PPTC7Q8NI37 304 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 LRCH3Q96II8 777 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 TRPV6Q9H1D0 765 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 ZSWIM6Q9HCJ5 1215 aa22.99■■□□□ 1.27
C6orf48-205ENST00000375640 hCG_1984214I3L0E3 225 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 B4GALT4O60513 344 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 PPFIA4O75335 1185 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 ADD1P35611 737 aaKnown RBP22.98■■□□□ 1.27
C6orf48-205ENST00000375640 PCNX4Q63HM2 1172 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 RUFY3Q7L099 469 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 TMEM199Q8N511 208 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 ZNF713Q8N859 430 aaPredicted RBP22.98■■□□□ 1.27
C6orf48-205ENST00000375640 ZFP91Q96JP5 570 aaPredicted RBP22.98■■□□□ 1.27
C6orf48-205ENST00000375640 INPP4AQ96PE3 977 aaPredicted RBP22.98■■□□□ 1.27
C6orf48-205ENST00000375640 TM6SF1Q9BZW5 370 aa22.98■■□□□ 1.27
C6orf48-205ENST00000375640 SPATA31C2B4DYI2 1134 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 EVCP57679 992 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 SP2Q02086 613 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 PPIGQ13427 754 aaKnown RBP eCLIP22.97■■□□□ 1.272e-7■□□□□ 10.7
C6orf48-205ENST00000375640 C9orf50Q5SZB4 431 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 WWC2Q6AWC2 1192 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 PPP1R18Q6NYC8 613 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 GPKOWQ92917 476 aaPredicted RBP eCLIP22.97■■□□□ 1.275e-16■■□□□ 13.4
C6orf48-205ENST00000375640 HIPK3Q9H422 1215 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 RTEL1Q9NZ71 1219 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 CYP46A1Q9Y6A2 500 aa22.97■■□□□ 1.27
C6orf48-205ENST00000375640 SPDYE3A6NKU9 549 aa22.96■■□□□ 1.27
C6orf48-205ENST00000375640 GGPS1O95749 300 aa22.96■■□□□ 1.27
C6orf48-205ENST00000375640 UBA1P22314 1058 aaKnown RBP22.96■■□□□ 1.27
C6orf48-205ENST00000375640 EPHB4P54760 987 aa22.96■■□□□ 1.27
C6orf48-205ENST00000375640 FAM47CQ5HY64 1035 aa22.96■■□□□ 1.27
C6orf48-205ENST00000375640 SPATA33Q96N06 139 aa22.96■■□□□ 1.27
C6orf48-205ENST00000375640 PPP1R12CQ9BZL4 782 aa22.96■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms