RNA–Protein interactions for RNA: ENST00000375329.6

APOA1-205, Transcript of apolipoprotein A1, humanhuman

TSL 2 BASIC

Gene APOA1, Length 927 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOA1-205ENST00000375329 CCDC62Q6P9F0 684 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 CXCL17Q6UXB2 119 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 CMTR1Q8N1G2 835 aaKnown RBP17.74■□□□□ 0.43
APOA1-205ENST00000375329 ZNF713Q8N859 430 aaPredicted RBP17.74■□□□□ 0.43
APOA1-205ENST00000375329 TM6SF1Q9BZW5 370 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 PSTPIP2Q9H939 334 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 PDLIM7Q9NR12 457 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 TMEM39AQ9NV64 488 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 BRPF3Q9ULD4 1205 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 CYP46A1Q9Y6A2 500 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 MRVI1Q9Y6F6 885 aa17.74■□□□□ 0.43
APOA1-205ENST00000375329 A6NJR5 290 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 TGFB3P10600 412 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 METAP2P50579 478 aaKnown RBP eCLIP17.73■□□□□ 0.43
APOA1-205ENST00000375329 ANAPC15P60006 121 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 IRX5P78411 483 aaPredicted RBP17.73■□□□□ 0.43
APOA1-205ENST00000375329 MDM2Q00987 491 aaPredicted RBP17.73■□□□□ 0.43
APOA1-205ENST00000375329 ITGA7Q13683 1181 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 GNPTABQ3T906 1256 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 XRRA1Q6P2D8 792 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 BRF1Q92994 677 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 GLT8D2Q9H1C3 349 aa17.73■□□□□ 0.43
APOA1-205ENST00000375329 MYH7BA7E2Y1 1941 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 RANBP2P49792 3224 aaKnown RBP17.72■□□□□ 0.43
APOA1-205ENST00000375329 KIAA0355O15063 1070 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 CPA1P15085 419 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 RAG1P15918 1043 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 LAMC2Q13753 1193 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 TMEM63BQ5T3F8 832 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 RUFY3Q7L099 469 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 HEATR3Q7Z4Q2 680 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 MTG1Q9BT17 334 aaPredicted RBP17.72■□□□□ 0.43
APOA1-205ENST00000375329 AGXT2Q9BYV1 514 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 EHMT1Q9H9B1 1298 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 ZSWIM6Q9HCJ5 1215 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 DDX41Q9UJV9 622 aaKnown RBP17.72■□□□□ 0.43
APOA1-205ENST00000375329 CNTNAP5Q8WYK1 1306 aa17.72■□□□□ 0.43
APOA1-205ENST00000375329 MYL3P08590 195 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 APOBRQ0VD83 1088 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 FAAP100Q0VG06 881 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 PPP1R18Q6NYC8 613 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 TDHQ8IZJ6 230 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 SLC43A3Q8NBI5 491 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 EMID1Q96A84 441 aaPredicted RBP17.71■□□□□ 0.43
APOA1-205ENST00000375329 KIF2CQ99661 725 aa17.71■□□□□ 0.43
APOA1-205ENST00000375329 V9GY48 417 aaPredicted RBP17.71■□□□□ 0.43
APOA1-205ENST00000375329 FRMPD4Q14CM0 1322 aa17.71■□□□□ 0.42
APOA1-205ENST00000375329 SPDYE3A6NKU9 549 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 MEIS2O14770 477 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 ARIH2O95376 493 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 PURAQ00577 322 aaKnown RBP17.7■□□□□ 0.42
APOA1-205ENST00000375329 AKAP17AQ02040 695 aaKnown RBP17.7■□□□□ 0.42
APOA1-205ENST00000375329 LY6KQ17RY6 165 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 USP17L6PQ6QN14 398 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 DHX37Q8IY37 1157 aaKnown RBP17.7■□□□□ 0.42
APOA1-205ENST00000375329 COPS5Q92905 334 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 UPF3BQ9BZI7 483 aaKnown RBP17.7■□□□□ 0.42
APOA1-205ENST00000375329 SCN10AQ9Y5Y9 1956 aa17.7■□□□□ 0.42
APOA1-205ENST00000375329 hCG_1642624A0A1W2PR95 340 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 TRIM43BA6NCK2 446 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 SUPT20HL2P0C7V6 817 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 PTGS1P23219 599 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 NAPAP54920 295 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 EVCP57679 992 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 FUT2Q10981 343 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 DGKDQ16760 1214 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 PCNX4Q63HM2 1172 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 SH3RF1Q7Z6J0 888 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 FAM126BQ8IXS8 530 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 CCDC12Q8WUD4 166 aaPredicted RBP17.69■□□□□ 0.42
APOA1-205ENST00000375329 BADQ92934 168 aa17.69■□□□□ 0.42
APOA1-205ENST00000375329 TRIM43Q96BQ3 446 aaPredicted RBP17.69■□□□□ 0.42
APOA1-205ENST00000375329 NID2Q14112 1375 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 LTBP2Q14767 1821 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 TIMP1P01033 207 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 FOSP01100 380 aaPredicted RBP17.68■□□□□ 0.42
APOA1-205ENST00000375329 CDC27P30260 824 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 ADD1P35611 737 aaKnown RBP17.68■□□□□ 0.42
APOA1-205ENST00000375329 PTPN11Q06124 597 aaPredicted RBP17.68■□□□□ 0.42
APOA1-205ENST00000375329 ARHGAP1Q07960 439 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 NLRX1Q86UT6 975 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 IL31RAQ8NI17 732 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 AFG1LQ8WV93 481 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 GPKOWQ92917 476 aaPredicted RBP eCLIP17.68■□□□□ 0.42
APOA1-205ENST00000375329 IL17RAQ96F46 866 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 CDHR1Q96JP9 859 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 FAM217BQ9NTX9 383 aaPredicted RBP17.68■□□□□ 0.42
APOA1-205ENST00000375329 BARHL2Q9NY43 387 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 TBX21Q9UL17 535 aa17.68■□□□□ 0.42
APOA1-205ENST00000375329 FIBPO43427 364 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 RGS20O76081 388 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 CD4P01730 458 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 MMP3P08254 477 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 ICAM3P32942 547 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 NEDD9Q14511 834 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 CELF3Q5SZQ8 465 aaKnown RBP17.67■□□□□ 0.42
APOA1-205ENST00000375329 WWC2Q6AWC2 1192 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 MCTP2Q6DN12 878 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 NFRKBQ6P4R8 1299 aa17.67■□□□□ 0.42
APOA1-205ENST00000375329 GIMAP8Q8ND71 665 aaPredicted RBP17.67■□□□□ 0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.3 ms