RNA–Protein interactions for RNA: ENST00000375315.6

C9orf3-203, Transcript of chromosome 9 open reading frame 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene C9orf3, Length 3,136 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-203ENST00000375315 BUB1BO60566 1050 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 NDUFA10O95299 355 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 IL1R1P14778 569 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 NR1D1P20393 614 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 HMGB2P26583 209 aaKnown RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 GSTO1P78417 241 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 C2orf54Q08AI8 447 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 CCDC122Q5T0U0 273 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 IFIT1BQ5T764 474 aaKnown RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 TICAM2Q86XR7 235 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 RASSF8Q8NHQ8 419 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 EYA3Q99504 573 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 CPVLQ9H3G5 476 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 PECAM1P16284 738 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 SARSP49591 514 aaKnown RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 SLMAPQ14BN4 828 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 ALX1Q15699 326 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 EMC10Q5UCC4 262 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 MMGT1Q8N4V1 131 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 CCDC47Q96A33 483 aaKnown RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 PLCD4Q9BRC7 762 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 RTFDC1Q9BY42 306 aaPredicted RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 EIF4ENIF1Q9NRA8 985 aaKnown RBP13.43□□□□□ -0.26
C9orf3-203ENST00000375315 TRIM10Q9UDY6 481 aa13.43□□□□□ -0.26
C9orf3-203ENST00000375315 AP1G2O75843 785 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 MDH1P40925 334 aaKnown RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 SEC24CP53992 1094 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 NFIAQ12857 509 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CAPRIN2Q6IMN6 1127 aaKnown RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 KANK3Q6NY19 840 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 C3orf20Q8ND61 904 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 PARD3BQ8TEW8 1205 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 TCP11Q8WWU5 503 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 MED15Q96RN5 788 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CNNM2Q9H8M5 875 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 SYNRGQ9UMZ2 1314 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ANO9A1A5B4 782 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 KRT86O43790 486 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 PRPHP41219 470 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CFAP58Q5T655 872 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ZNF444Q8N0Y2 327 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 KRI1Q8N9T8 703 aaKnown RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 TSEN2Q8NCE0 465 aaKnown RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CAVIN3Q969G5 261 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ZBTB10Q96DT7 871 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CYFIP2Q96F07 1278 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 IRAK4Q9NWZ3 460 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CASZ1Q86V15 1759 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 CLRN2A0PK11 232 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 GUCY1A2P33402 732 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 KRT9P35527 623 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 XRCC4Q13426 336 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 KCNB1Q14721 858 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 PDCD2Q16342 344 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ANKRD20A8PQ5CZ79 823 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ZFPM1Q8IX07 1006 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ENAHQ8N8S7 591 aaPredicted RBP13.42□□□□□ -0.26
C9orf3-203ENST00000375315 P3H4Q92791 437 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 ZIM3Q96PE6 472 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 KCNJ14Q9UNX9 436 aa13.42□□□□□ -0.26
C9orf3-203ENST00000375315 MYH7P12883 1935 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 TTC36A6NLP5 189 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 MGRN1O60291 552 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 TSPY3P0CV98 308 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 TSPY8P0CW00 308 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 POLD1P28340 1107 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 IARSP41252 1262 aaKnown RBP13.41□□□□□ -0.26
C9orf3-203ENST00000375315 FBXL16Q8N461 479 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 ARFGAP2Q8N6H7 521 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 SPAG5Q96R06 1193 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 ALG1Q9BT22 464 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 JADE2Q9NQC1 790 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 GOLGA8HP0CJ92 632 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 RPS6KA3P51812 740 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 KRT83P78385 493 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 KLHL10Q6JEL2 608 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 ZNF654Q8IZM8 581 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 NSMCE1Q8WV22 266 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 ZSCAN10Q96SZ4 725 aaPredicted RBP13.41□□□□□ -0.26
C9orf3-203ENST00000375315 DDX4Q9NQI0 724 aaKnown RBP13.41□□□□□ -0.26
C9orf3-203ENST00000375315 ATP8A2Q9NTI2 1148 aa13.41□□□□□ -0.26
C9orf3-203ENST00000375315 CACNA1SQ13698 1873 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 PDE2AO00408 941 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-203ENST00000375315 N4BP3O15049 544 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 RTN1Q16799 776 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 TSR1Q2NL82 804 aaKnown RBP13.4□□□□□ -0.26
C9orf3-203ENST00000375315 CDKAL1Q5VV42 579 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 PPP4R3AQ6IN85 833 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 SPDYE1Q8NFV5 336 aaPredicted RBP13.4□□□□□ -0.26
C9orf3-203ENST00000375315 OR8K1Q8NGG5 319 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 HINFPQ9BQA5 517 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 TDRD3Q9H7E2 651 aaKnown RBP13.4□□□□□ -0.26
C9orf3-203ENST00000375315 SERTAD1Q9UHV2 236 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 TRPC6Q9Y210 931 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 ENO4A6NNW6 628 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 KRT14P02533 472 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 IDEP14735 1019 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 CUL5Q93034 780 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 TMEM87BQ96K49 555 aa13.4□□□□□ -0.26
C9orf3-203ENST00000375315 MAP3K14Q99558 947 aa13.4□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 19.7 ms