RNA–Protein interactions for RNA: ENST00000375274.6

PTCH1-203, Transcript of patched 1, humanhuman

TSL 5 BASIC

Gene PTCH1, Length 4,720 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-203ENST00000375274 KIF28PB7ZC32 967 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 MYO1FO00160 1098 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 PSMC2P35998 433 aaKnown RBP12.58□□□□□ -0.4
PTCH1-203ENST00000375274 ALKBH5Q6P6C2 394 aaKnown RBP12.58□□□□□ -0.4
PTCH1-203ENST00000375274 CCDC17Q96LX7 622 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 ZNF148Q9UQR1 794 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 PTPN22Q9Y2R2 807 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 RNF17Q9BXT8 1623 aaKnown RBP12.58□□□□□ -0.4
PTCH1-203ENST00000375274 DLATP10515 647 aaKnown RBP12.58□□□□□ -0.4
PTCH1-203ENST00000375274 PRCPP42785 496 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 MAGEA9P43362 315 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 SCNN1DP51172 638 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 RAB3IL1Q8TBN0 382 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 MTA3Q9BTC8 594 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 RAB20Q9NX57 234 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 NOVA2Q9UNW9 492 aaKnown RBP12.58□□□□□ -0.4
PTCH1-203ENST00000375274 SSX2IPQ9Y2D8 614 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 POLR2MP0CAP2 368 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 FAM102BQ5T8I3 360 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 USPL1Q5W0Q7 1092 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 OTUD6AQ7L8S5 288 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 SGMS1Q86VZ5 419 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 RSAD2Q8WXG1 361 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 ANKRD7Q92527 254 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 DYNLL2Q96FJ2 89 aa12.58□□□□□ -0.4
PTCH1-203ENST00000375274 THRAP3Q9Y2W1 955 aaKnown RBP12.58□□□□□ -0.4
PTCH1-203ENST00000375274 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 LRRN2O75325 713 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 GCKP35557 465 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 PDCLQ13371 301 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 E2F5Q15329 346 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 E2F4Q16254 413 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 MUM1Q2TAK8 710 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 XKR9Q5GH70 373 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 C10orf76Q5T2E6 689 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 CASC4Q6P4E1 433 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 BBOF1Q8ND07 529 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 MRPL11Q9Y3B7 192 aaKnown RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 TTC26A0AVF1 554 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 hCG_1984214I3L0E3 225 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 PHBP35232 272 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 SLC8A3P57103 927 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 MYL7Q01449 175 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 AOC3Q16853 763 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 PHLDB2Q86SQ0 1253 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 ZNF713Q8N859 430 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 SMC1BQ8NDV3 1235 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 LEMD3Q9Y2U8 911 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 PABPN1LA6NDY0 278 aaKnown RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 HMGB1P1B2RPK0 211 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 CLIC2O15247 247 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 ZBED4O75132 1171 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 GFPT2O94808 682 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 KRT19P08727 400 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 HOXA7P31268 230 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 RCAN1P53805 252 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 SEPT2Q15019 361 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 METTL16Q86W50 562 aaKnown RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 KIAA0825Q8IV33 1275 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 FMO2Q99518 471 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 BRIP1Q9BX63 1249 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 IRX2Q9BZI1 471 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 REREQ9P2R6 1566 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 USP17L3A6NCW0 530 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 USP17L4A6NCW7 530 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 NSFP46459 744 aaKnown RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 SARNPP82979 210 aaKnown RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 MTF1Q14872 753 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 ZKSCAN8Q15776 578 aaPredicted RBP12.57□□□□□ -0.4
PTCH1-203ENST00000375274 TRIM68Q6AZZ1 485 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 PHLDB3Q6NSJ2 640 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 USP17L1Q7RTZ2 530 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 KSR1Q8IVT5 923 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 TEKT3Q9BXF9 490 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 GCNT4Q9P109 453 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 ARAP3Q8WWN8 1544 aa12.57□□□□□ -0.4
PTCH1-203ENST00000375274 HECW2Q9P2P5 1572 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 TTLL1O95922 423 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 HSPA6P17066 643 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 ALX1Q15699 326 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 GLE1Q53GS7 698 aaKnown RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 TADA2BQ86TJ2 420 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 NEK9Q8TD19 979 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 CNOT10Q9H9A5 744 aaKnown RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 EFCC1Q9HA90 598 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 ST7Q9NRC1 585 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 CRB1P82279 1406 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 TXNDC9O14530 226 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 STK10O94804 968 aaKnown RBP12.56□□□□□ -0.4
PTCH1-203ENST00000375274 LLGL1Q15334 1064 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 LRCH2Q5VUJ6 765 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 CDAN1Q8IWY9 1227 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 LRRC8CQ8TDW0 803 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 ATP2A3Q93084 1043 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 KLHL29Q96CT2 875 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 SERPINB13Q9UIV8 391 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 CD2APQ9Y5K6 639 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 ADGRL3Q9HAR2 1447 aa12.56□□□□□ -0.4
PTCH1-203ENST00000375274 TESPA1A2RU30 521 aaPredicted RBP12.56□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 36.8 ms