RNA–Protein interactions for RNA: ENST00000374223.5

UBXN11-207, Transcript of UBX domain protein 11, humanhuman

TSL 1 (best) BASIC

Gene UBXN11, Length 1,312 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN11-207ENST00000374223 POLR3EQ9NVU0 708 aa16.6■□□□□ 0.25
UBXN11-207ENST00000374223 MRPL11Q9Y3B7 192 aaKnown RBP16.6■□□□□ 0.25
UBXN11-207ENST00000374223 ZBTB5O15062 677 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 NR3C2P08235 984 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 MYCLP12524 364 aaPredicted RBP16.59■□□□□ 0.25
UBXN11-207ENST00000374223 MYOGP15173 224 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 RXRAP19793 462 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 RABGGTBP53611 331 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 SP2Q02086 613 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 HIC1Q14526 733 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 WTAPQ15007 396 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 TMEM67Q5HYA8 995 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 TJAP1Q5JTD0 557 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 ARHGEF16Q5VV41 709 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 NCOA7Q8NI08 942 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 NSUN6Q8TEA1 469 aaKnown RBP16.59■□□□□ 0.25
UBXN11-207ENST00000374223 AMNQ9BXJ7 453 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 LY9Q9HBG7 655 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 DDX41Q9UJV9 622 aaKnown RBP16.59■□□□□ 0.25
UBXN11-207ENST00000374223 YBX2Q9Y2T7 364 aaKnown RBP16.59■□□□□ 0.25
UBXN11-207ENST00000374223 PCDHA1Q9Y5I3 950 aa16.59■□□□□ 0.25
UBXN11-207ENST00000374223 MMP3P08254 477 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 CPT1AP50416 773 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 TRDNQ13061 729 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 TTLL4Q14679 1199 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 DEFB128Q7Z7B8 93 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 USP38Q8NB14 1042 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 GAS2L1Q99501 681 aaPredicted RBP16.58■□□□□ 0.24
UBXN11-207ENST00000374223 PDCD2LQ9BRP1 358 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 ESYT1Q9BSJ8 1104 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 PNMA2Q9UL42 364 aa16.58■□□□□ 0.24
UBXN11-207ENST00000374223 SLC27A2O14975 620 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 PLEKHA8P1O95397 391 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 GHRHRQ02643 423 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 GPNMBQ14956 572 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 STXBP2Q15833 593 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 TCTN1Q2MV58 587 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 GDF6Q6KF10 455 aaPredicted RBP16.57■□□□□ 0.24
UBXN11-207ENST00000374223 FCHSD1Q86WN1 690 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 MCF2L2Q86YR7 1114 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 HERVK_113Q902F9 699 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 SEZ6LQ9BYH1 1024 aa16.57■□□□□ 0.24
UBXN11-207ENST00000374223 hCG_1642624A0A1W2PR95 340 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 NKRFO15226 690 aaKnown RBP eCLIP16.56■□□□□ 0.24
UBXN11-207ENST00000374223 FGBP02675 491 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 ZNF286BP0CG31 522 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 NT5C2P49902 561 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 ZNF200P98182 395 aaPredicted RBP16.56■□□□□ 0.24
UBXN11-207ENST00000374223 PGM5Q15124 567 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 RALYLQ86SE5 291 aaKnown RBP16.56■□□□□ 0.24
UBXN11-207ENST00000374223 ZNF654Q8IZM8 581 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 DHX38Q92620 1227 aaKnown RBP16.56■□□□□ 0.24
UBXN11-207ENST00000374223 WNT8BQ93098 351 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 IWS1Q96ST2 819 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 MTIF3Q9H2K0 278 aaKnown RBP16.56■□□□□ 0.24
UBXN11-207ENST00000374223 NKX2-4Q9H2Z4 354 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 TRANK1O15050 2925 aa16.56■□□□□ 0.24
UBXN11-207ENST00000374223 PRC1O43663 620 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 ARHGEF15O94989 841 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 GH1P01241 217 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 MRPS9P82933 396 aaKnown RBP16.55■□□□□ 0.24
UBXN11-207ENST00000374223 NECTIN1Q15223 517 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 RAB30Q15771 203 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 SRBD1Q8N5C6 995 aaKnown RBP16.55■□□□□ 0.24
UBXN11-207ENST00000374223 TCEANC2Q96MN5 208 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 ALG1Q9BT22 464 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 PRDM12Q9H4Q4 367 aa16.55■□□□□ 0.24
UBXN11-207ENST00000374223 SH2B2O14492 632 aaPredicted RBP16.54■□□□□ 0.24
UBXN11-207ENST00000374223 EIF3JO75822 258 aaKnown RBP16.54■□□□□ 0.24
UBXN11-207ENST00000374223 SEMA3FQ13275 785 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 ADGRE1Q14246 886 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 CREB3L3Q68CJ9 461 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 SPRED2Q7Z698 418 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 VSIG10LQ86VR7 867 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 ATXN2LQ8WWM7 1075 aaKnown RBP16.54■□□□□ 0.24
UBXN11-207ENST00000374223 HDAC6Q9UBN7 1215 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 MSRAQ9UJ68 235 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 MRVI1Q9Y6F6 885 aa16.54■□□□□ 0.24
UBXN11-207ENST00000374223 PNMA6FA0A0J9YX94 578 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 TNFRSF10AO00220 468 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 HSDL1Q3SXM5 330 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 NFRKBQ6P4R8 1299 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 USP17L6PQ6QN14 398 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 TMCO2Q7Z6W1 182 aaPredicted RBP16.53■□□□□ 0.24
UBXN11-207ENST00000374223 RASEFQ8IZ41 740 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 OSBPL7Q9BZF2 842 aa16.53■□□□□ 0.24
UBXN11-207ENST00000374223 ERICH2A1L162 156 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 GCOM1H8Y6P7 765 aaPredicted RBP16.52■□□□□ 0.24
UBXN11-207ENST00000374223 IQCF3P0C7M6 154 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 POLR2MP0CAP2 368 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 PSEN2P49810 448 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 PTGISQ16647 500 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 MYSM1Q5VVJ2 828 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 CATIPQ7Z7H3 387 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 CCDC82Q8N4S0 544 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 TTC28Q96AY4 2481 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 MPHOSPH6Q99547 160 aaKnown RBP16.52■□□□□ 0.24
UBXN11-207ENST00000374223 RTEL1Q9NZ71 1219 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 THEGQ9P2T0 379 aa16.52■□□□□ 0.24
UBXN11-207ENST00000374223 ZBBXA8MT70 800 aa16.51■□□□□ 0.23
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms