RNA–Protein interactions for RNA: ENST00000373645.3

SP140-202, Transcript of SP140 nuclear body protein, humanhuman

TSL 1 (best) BASIC

Gene SP140, Length 814 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SP140-202ENST00000373645 ABHD16BQ9H3Z7 469 aa8.98□□□□□ -0.97
SP140-202ENST00000373645 CERS4Q9HA82 394 aa8.98□□□□□ -0.97
SP140-202ENST00000373645 SLC28A3Q9HAS3 691 aa8.98□□□□□ -0.97
SP140-202ENST00000373645 SLC38A10Q9HBR0 1119 aa8.98□□□□□ -0.97
SP140-202ENST00000373645 MSRAQ9UJ68 235 aa8.98□□□□□ -0.97
SP140-202ENST00000373645 GNEQ9Y223 722 aaKnown RBP8.98□□□□□ -0.97
SP140-202ENST00000373645 SOWAHBA6NEL2 793 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 SH2B2O14492 632 aaPredicted RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 ATP2A1O14983 1001 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 CD2BP2O95400 341 aaKnown RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 FGBP02675 491 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 SMPD1P17405 629 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 EVCP57679 992 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 ITGA7Q13683 1181 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 BECN1Q14457 450 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 WTAPQ15007 396 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 SEC23AQ15436 765 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 FSCN1Q16658 493 aaKnown RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 PPP4R3BQ5MIZ7 849 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 EEPD1Q7L9B9 569 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 FBXO16Q8IX29 292 aaPredicted RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 FAM133AQ8N9E0 248 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 PRPF38AQ8NAV1 312 aaKnown RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 TET1Q8NFU7 2136 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 BRF1Q92994 677 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 FAM122AQ96E09 287 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 CEP95Q96GE4 821 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 AGBL1Q96MI9 1066 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 EPHX3Q9H6B9 360 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 A1CFQ9NQ94 594 aaKnown RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 IL17RBQ9NRM6 502 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 TRMT13Q9NUP7 481 aaKnown RBP8.97□□□□□ -0.97
SP140-202ENST00000373645 NYAP2Q9P242 653 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 CLIP2Q9UDT6 1046 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 LIMCH1Q9UPQ0 1083 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 ZNF536O15090 1300 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 TNKSO95271 1327 aa8.97□□□□□ -0.97
SP140-202ENST00000373645 CCDC69A6NI79 296 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 ZBBXA8MT70 800 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 K7ELQ4 463 aaPredicted RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 TLR3O15455 904 aaKnown RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 NMT2O60551 498 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 CA3P07451 260 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 CYP2C9P11712 490 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 NOVP48745 357 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 NKX3-2P78367 333 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 TNFAIP2Q03169 654 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 SKIV2LQ15477 1246 aaKnown RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 MUM1L1Q5H9M0 696 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 IFIT1BQ5T764 474 aaKnown RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 CCDC174Q6PII3 467 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 SYNE3Q6ZMZ3 975 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 NFXL1Q6ZNB6 911 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 SGMS1Q86VZ5 419 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 HSCBQ8IWL3 235 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 ENAHQ8N8S7 591 aaPredicted RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 ANKS1AQ92625 1134 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 ZNF274Q96GC6 653 aaPredicted RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 LARP6Q9BRS8 491 aaKnown RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 LY9Q9HBG7 655 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 SPC25Q9HBM1 224 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 C11orf16Q9NQ32 467 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 GPHNQ9NQX3 736 aaPredicted RBP8.96□□□□□ -0.98
SP140-202ENST00000373645 RNF146Q9NTX7 359 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 MTMR4Q9NYA4 1195 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 SLC4A7Q9Y6M7 1214 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 MUC6Q6W4X9 2439 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 PLIN4Q96Q06 1357 aa8.96□□□□□ -0.98
SP140-202ENST00000373645 COL4A4P53420 1690 aaPredicted RBP8.95□□□□□ -0.98
SP140-202ENST00000373645 FAM86C2PA6NEL3 165 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 DYNC1LI2O43237 492 aaPredicted RBP8.95□□□□□ -0.98
SP140-202ENST00000373645 ZBED4O75132 1171 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 TTLL1O95922 423 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 ATP2A2P16615 1042 aaKnown RBP8.95□□□□□ -0.98
SP140-202ENST00000373645 APOBRQ0VD83 1088 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 RCSD1Q6JBY9 416 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 TAPT1Q6NXT6 567 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 DEFB128Q7Z7B8 93 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 CHST13Q8NET6 341 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 MKL1Q969V6 931 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 TMX3Q96JJ7 454 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 LRFN3Q9BTN0 628 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 SH2B1Q9NRF2 756 aaPredicted RBP8.95□□□□□ -0.98
SP140-202ENST00000373645 BRPF3Q9ULD4 1205 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 TPCN1Q9ULQ1 816 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 ISY1Q9ULR0 285 aaKnown RBP8.95□□□□□ -0.98
SP140-202ENST00000373645 MTCH2Q9Y6C9 303 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 LAMA4Q16363 1823 aa8.95□□□□□ -0.98
SP140-202ENST00000373645 PTPRSQ13332 1948 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 KLF18A0A0U1RQI7 1052 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 TMEM232C9JQI7 657 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 CALM1P0DP23 149 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 CALM2P0DP24 149 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 CALM3P0DP25 149 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 TOP1P11387 765 aaKnown RBP8.94□□□□□ -0.98
SP140-202ENST00000373645 PDIA3P30101 505 aaKnown RBP8.94□□□□□ -0.98
SP140-202ENST00000373645 ME3Q16798 604 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 SLFN13Q68D06 897 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 APOA5Q6Q788 366 aa8.94□□□□□ -0.98
SP140-202ENST00000373645 TMCO2Q7Z6W1 182 aaPredicted RBP8.94□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 18.7 ms