RNA–Protein interactions for RNA: ENST00000373554.5

HDAC8-201, Transcript of histone deacetylase 8, humanhuman

TSL 2 BASIC

Gene HDAC8, Length 833 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC8-201ENST00000373554 GLT8D2Q9H1C3 349 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 ALDH8A1Q9H2A2 487 aaPredicted RBP13.81□□□□□ -0.2
HDAC8-201ENST00000373554 EHMT1Q9H9B1 1298 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 STARD7Q9NQZ5 370 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 MRVI1Q9Y6F6 885 aa13.81□□□□□ -0.2
HDAC8-201ENST00000373554 PRPF3O43395 683 aaKnown RBP13.8□□□□□ -0.2
HDAC8-201ENST00000373554 STAM2O75886 525 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 ASGR1P07306 291 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 CPT1AP50416 773 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 NEK4P51957 841 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 AK2P54819 239 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 BEX3Q00994 111 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 NTRK3Q16288 839 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 UBE2SQ16763 222 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 GNPTABQ3T906 1256 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 BRDTQ58F21 947 aaPredicted RBP13.8□□□□□ -0.2
HDAC8-201ENST00000373554 TMEM63BQ5T3F8 832 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 CCSAPQ6IQ19 270 aaPredicted RBP13.8□□□□□ -0.2
HDAC8-201ENST00000373554 SLC39A5Q6ZMH5 540 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 VSIG10LQ86VR7 867 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 SLKQ9H2G2 1235 aaPredicted RBP13.8□□□□□ -0.2
HDAC8-201ENST00000373554 RIC8AQ9NPQ8 531 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 GTF3C3Q9Y5Q9 886 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 ALPK3Q96L96 1907 aa13.8□□□□□ -0.2
HDAC8-201ENST00000373554 SMCO2A6NFE2 343 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 H0YGN5 161 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 CTAGE5O15320 804 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 CDKL5O76039 1030 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 ARIH2O95376 493 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 PTGS1P23219 599 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 RTP1P59025 263 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 IRX5P78411 483 aaPredicted RBP13.79□□□□□ -0.2
HDAC8-201ENST00000373554 SNX17Q15036 470 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 TYW1BQ6NUM6 668 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 XRRA1Q6P2D8 792 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 CCDC62Q6P9F0 684 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 KCNV1Q6PIU1 500 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 CCDC148Q8NFR7 591 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 C22orf23Q9BZE7 217 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 TPCN1Q9ULQ1 816 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 ATP11BQ9Y2G3 1177 aa13.79□□□□□ -0.2
HDAC8-201ENST00000373554 ESYT2A0FGR8 921 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 PPFIA3O75145 1194 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 CABYRO75952 493 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 FOSP01100 380 aaPredicted RBP13.78□□□□□ -0.2
HDAC8-201ENST00000373554 GH1P01241 217 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 SSRP1Q08945 709 aaKnown RBP13.78□□□□□ -0.2
HDAC8-201ENST00000373554 AP3B2Q13367 1082 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 LY6KQ17RY6 165 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 TRIM60Q495X7 471 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 C1orf53Q5VUE5 145 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 PCNX4Q63HM2 1172 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 CXCL17Q6UXB2 119 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 COPS5Q92905 334 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 VTI1AQ96AJ9 217 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 C6orf50Q9HD87 102 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 POLR3EQ9NVU0 708 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 PCDHA6Q9UN73 950 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 PCDHA8Q9Y5H6 950 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 ELP1O95163 1332 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 KIAA1217Q5T5P2 1943 aa13.78□□□□□ -0.2
HDAC8-201ENST00000373554 PFKFB2O60825 505 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 RGS20O76081 388 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 DEXIO95424 95 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 TGFB3P10600 412 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 GNA11P29992 359 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 MRPS9P82933 396 aaKnown RBP13.77□□□□□ -0.21
HDAC8-201ENST00000373554 SCRN1Q12765 414 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 PKN1Q16512 942 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 MROH7Q68CQ1 1323 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 INPP4AQ96PE3 977 aaPredicted RBP13.77□□□□□ -0.21
HDAC8-201ENST00000373554 PRKAG2Q9UGJ0 569 aa13.77□□□□□ -0.21
HDAC8-201ENST00000373554 DDX41Q9UJV9 622 aaKnown RBP13.77□□□□□ -0.21
HDAC8-201ENST00000373554 A0A0U1RQG5 324 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 A6NJR5 290 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 FIBPO43427 364 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 KPNA6O60684 536 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 RBM25P49756 843 aaKnown RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 ARHGAP1Q07960 439 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 MCTP2Q6DN12 878 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 NLRX1Q86UT6 975 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 DHX37Q8IY37 1157 aaKnown RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 REXO1Q8N1G1 1221 aaKnown RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 BICD2Q8TD16 824 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 EMID1Q96A84 441 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 ZFP91Q96JP5 570 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 ZMYND12Q9H0C1 365 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 RTEL1Q9NZ71 1219 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 VPS54Q9P1Q0 977 aa13.76□□□□□ -0.21
HDAC8-201ENST00000373554 ZMYND8Q9ULU4 1186 aaPredicted RBP13.76□□□□□ -0.21
HDAC8-201ENST00000373554 STK36Q9NRP7 1315 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 PQBP1O60828 265 aaKnown RBP13.75□□□□□ -0.21
HDAC8-201ENST00000373554 GGPS1O95749 300 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 MYL3P08590 195 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 SYN1P17600 705 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 UBA1P22314 1058 aaKnown RBP13.75□□□□□ -0.21
HDAC8-201ENST00000373554 CLK2P49760 499 aaKnown RBP13.75□□□□□ -0.21
HDAC8-201ENST00000373554 TLE2Q04725 743 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 LAMC2Q13753 1193 aa13.75□□□□□ -0.21
HDAC8-201ENST00000373554 AFG1LQ8WV93 481 aa13.75□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 35 ms