RNA–Protein interactions for RNA: ENST00000372190.7

RAPGEF1-202, Transcript of Rap guanine nucleotide exchange factor 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene RAPGEF1, Length 6,045 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAPGEF1-202ENST00000372190 SYNE4Q8N205 404 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 NOX5Q96PH1 765 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 TUBB6Q9BUF5 446 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 COPRSQ9NQ92 184 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 UNC13BO14795 1591 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 GTPBP10A4D1E9 387 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 C17orf53Q8N3J3 647 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 IGSF22Q8N9C0 903 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 KIFAP3Q92845 792 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 SECISBP2LQ93073 1101 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 SLC4A7Q9Y6M7 1214 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 KRT4P19013 534 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 ATP1A2P50993 1020 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 VWA3BQ502W6 1294 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 APLFQ8IW19 511 aaPredicted RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 FAM186BQ8IYM0 893 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 RAB17Q9H0T7 212 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 DNM3Q9UQ16 869 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 GAS7O60861 476 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 MCF2P10911 925 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 CFAP221Q4G0U5 840 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 CAPRIN2Q6IMN6 1127 aaKnown RBP15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 PHKBQ93100 1093 aa15.3■□□□□ 0.04
RAPGEF1-202ENST00000372190 GDF11O95390 407 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 SNX29Q8TEQ0 813 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 FGD4Q96M96 766 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 LLPHQ9BRT6 129 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 PSTPIP2Q9H939 334 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 ASIC3Q9UHC3 531 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 hCG_1642624A0A1W2PR95 340 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 SEPT2Q15019 361 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 HLFQ16534 295 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 LRWD1Q9UFC0 647 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 DIS3L2Q8IYB7 885 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 ARHGEF40Q8TER5 1519 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 SCYL3Q8IZE3 742 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 ZNF654Q8IZM8 581 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 KLHL29Q96CT2 875 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 TRIM31Q9BZY9 425 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 SPOPO43791 374 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 FANCCQ00597 558 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 TBC1D10BQ4KMP7 808 aaPredicted RBP15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 MIGA2Q7L4E1 593 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 PNMA1Q8ND90 353 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 AP5M1Q9H0R1 490 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 DHX36Q9H2U1 1008 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 GPR108Q9NPR9 543 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 WDR70Q9NW82 654 aa15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 CHCHD3Q9NX63 227 aaKnown RBP15.29■□□□□ 0.04
RAPGEF1-202ENST00000372190 IL1RL1Q01638 556 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 AOC3Q16853 763 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 SPICE1Q8N0Z3 855 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 AGTPBP1Q9UPW5 1226 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 CALUO43852 315 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 IQCDQ96DY2 449 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 COQ7Q99807 217 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 KRT82Q9NSB4 513 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 MYO3BQ8WXR4 1341 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 MAFGO15525 162 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 ECE2O60344 883 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 UBE3CQ15386 1083 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 LMBRD1Q9NUN5 540 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 SPATA31A1Q5TZJ5 1347 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 ACBD5Q5T8D3 534 aaPredicted RBP15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 CCDC13Q8IYE1 715 aa15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 PPWD1Q96BP3 646 aaKnown RBP15.28■□□□□ 0.04
RAPGEF1-202ENST00000372190 CAPN9O14815 690 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 CEP55Q53EZ4 464 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 NXNQ6DKJ4 435 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 ZNF277Q9NRM2 450 aaPredicted RBP15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 RASSF10A6NK89 507 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 GOLGA8HP0CJ92 632 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 KRT5P13647 590 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 PPARDQ03181 441 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 CHGBP05060 677 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 SNX1Q13596 522 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 CUL3Q13618 768 aa15.27■□□□□ 0.04
RAPGEF1-202ENST00000372190 GRIN3BO60391 1043 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 NBNO60934 754 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 HDDC2Q7Z4H3 204 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 RNF169Q8NCN4 708 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 TEKT2Q9UIF3 430 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 RAD51AP2Q09MP3 1159 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 MMEL1Q495T6 779 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 TPH2Q8IWU9 490 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 KLHL7Q8IXQ5 586 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 MYCT1Q8N699 235 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 LZTS1Q9Y250 596 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 MAD1L1Q9Y6D9 718 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 SESN1Q9Y6P5 492 aa15.27■□□□□ 0.03
RAPGEF1-202ENST00000372190 NR1I2O75469 434 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 MYCP01106 439 aaPredicted RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 SLC44A4Q53GD3 710 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 GNL3Q9BVP2 549 aaKnown RBP eCLIP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 ZNF229Q9UJW7 825 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 EFCAB8A8MWE9 144 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 TRAF5O00463 557 aa15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 STK10O94804 968 aaKnown RBP15.26■□□□□ 0.03
RAPGEF1-202ENST00000372190 CYP19A1P11511 503 aaPredicted RBP15.26■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms