RNA–Protein interactions for RNA: ENST00000368690.7

CHTOP-203, Transcript of chromatin target of PRMT1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene CHTOP, Length 2,165 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHTOP-203ENST00000368690 ABCB11O95342 1321 aa19.28■□□□□ 0.68
CHTOP-203ENST00000368690 GRID2IPA4D2P6 1211 aa19.28■□□□□ 0.68
CHTOP-203ENST00000368690 MDH1P40925 334 aaKnown RBP19.28■□□□□ 0.68
CHTOP-203ENST00000368690 MTIF2P46199 727 aaKnown RBP19.28■□□□□ 0.68
CHTOP-203ENST00000368690 KLK7P49862 253 aa19.28■□□□□ 0.68
CHTOP-203ENST00000368690 SMCR8Q8TEV9 937 aaPredicted RBP19.28■□□□□ 0.68
CHTOP-203ENST00000368690 PCMTD1Q96MG8 357 aaPredicted RBP19.28■□□□□ 0.68
CHTOP-203ENST00000368690 CCDC43Q96MW1 224 aaKnown RBP19.28■□□□□ 0.68
CHTOP-203ENST00000368690 ACTR5Q9H9F9 607 aaPredicted RBP19.28■□□□□ 0.68
CHTOP-203ENST00000368690 SH3GLB2Q9NR46 395 aa19.28■□□□□ 0.68
CHTOP-203ENST00000368690 TMCO5BA8MYB1 307 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 LAD1O00515 517 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 RASSF9O75901 435 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 C6orf89Q6UWU4 347 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 DTHD1Q6ZMT9 781 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 KRT26Q7Z3Y9 468 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 MYCBPAPQ8TBZ2 947 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 ATP6V1G3Q96LB4 118 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 TLR10Q9BXR5 811 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 RBM12Q9NTZ6 932 aaKnown RBP19.27■□□□□ 0.68
CHTOP-203ENST00000368690 PREPLQ4J6C6 727 aaPredicted RBP19.27■□□□□ 0.68
CHTOP-203ENST00000368690 NLRP14Q86W24 1093 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 SRBD1Q8N5C6 995 aaKnown RBP19.27■□□□□ 0.68
CHTOP-203ENST00000368690 ARFGAP2Q8N6H7 521 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 PIK3R5Q8WYR1 880 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 AKT1S1Q96B36 256 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 CCT8L2Q96SF2 557 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 EDEM3Q9BZQ6 932 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 SIK3Q9Y2K2 1263 aa19.27■□□□□ 0.68
CHTOP-203ENST00000368690 MINDY4BA8MYZ0 360 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 KRT14P02533 472 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 RDXP35241 583 aaKnown RBP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 NEDD9Q14511 834 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 SF3B3Q15393 1217 aaKnown RBP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 SLC10A5Q5PT55 438 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 ANKRD40Q6AI12 368 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 CCDC84Q86UT8 332 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 SH2D3CQ8N5H7 860 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 NOX5Q96PH1 765 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 KLC4Q9NSK0 619 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 SSU72P8A0A1W2PR75 194 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 EIF4A3P38919 411 aaKnown RBP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 PRPHP41219 470 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 MATR3P43243 847 aaKnown RBP eCLIP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 ATP1A2P50993 1020 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 TYW1BQ6NUM6 668 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 LRIG3Q6UXM1 1119 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 COL23A1Q86Y22 540 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 CCDC50Q8IVM0 306 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 MAGEC3Q8TD91 643 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 ZKSCAN4Q969J2 545 aaPredicted RBP19.26■□□□□ 0.67
CHTOP-203ENST00000368690 BRIP1Q9BX63 1249 aa19.26■□□□□ 0.67
CHTOP-203ENST00000368690 PLEKP08567 350 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-203ENST00000368690 UBA7P41226 1012 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 ITGB3BPQ13352 177 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-203ENST00000368690 CCDC40Q4G0X9 1142 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 WLSQ5T9L3 541 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 KLHDC7AQ5VTJ3 777 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 C2CD5Q86YS7 1000 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 BLIDQ8IZY5 108 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 HINFPQ9BQA5 517 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 JPH2Q9BR39 696 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-203ENST00000368690 MYH1P12882 1939 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 TAF1P21675 1872 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 RBAK-RBAKDNI3L0D1 243 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 AKR1B10O60218 316 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 SERPINB2P05120 415 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 GLI1P08151 1106 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 HOXA7P31268 230 aaPredicted RBP19.25■□□□□ 0.67
CHTOP-203ENST00000368690 HSPA9P38646 679 aaKnown RBP19.25■□□□□ 0.67
CHTOP-203ENST00000368690 MAGEA1P43355 309 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 GUCY1A3Q02108 690 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 KCTD16Q68DU8 428 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 TAX1BP1Q86VP1 789 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 C7orf25Q9BPX7 421 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 MCM8Q9UJA3 840 aa19.25■□□□□ 0.67
CHTOP-203ENST00000368690 CARSP49589 748 aaKnown RBP19.24■□□□□ 0.67
CHTOP-203ENST00000368690 ASTE1Q2TB18 679 aaPredicted RBP19.24■□□□□ 0.67
CHTOP-203ENST00000368690 PRR5LQ6MZQ0 368 aa19.24■□□□□ 0.67
CHTOP-203ENST00000368690 CCDC13Q8IYE1 715 aa19.24■□□□□ 0.67
CHTOP-203ENST00000368690 MIGA1Q8NAN2 632 aa19.24■□□□□ 0.67
CHTOP-203ENST00000368690 CELF1Q92879 486 aaKnown RBP19.24■□□□□ 0.67
CHTOP-203ENST00000368690 AK8Q96MA6 479 aa19.24■□□□□ 0.67
CHTOP-203ENST00000368690 LRP2BPQ9P2M1 347 aa19.24■□□□□ 0.67
CHTOP-203ENST00000368690 CASZ1Q86V15 1759 aa19.24■□□□□ 0.67
CHTOP-203ENST00000368690 MAGEB6P1A0A0J9YX57 407 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 SNAP23O00161 211 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 HEXIM1O94992 359 aaKnown RBP19.23■□□□□ 0.67
CHTOP-203ENST00000368690 CYP7A1P22680 504 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 VWA3BQ502W6 1294 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 RASSF8Q8NHQ8 419 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 NFU1Q9UMS0 254 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 PCDHA4Q9UN74 947 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 GOLGA6L7A0A1B0GV03 622 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 CHRNDQ07001 517 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 GIMAP7Q8NHV1 300 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 EPB41L5Q9HCM4 733 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 PLCB1Q9NQ66 1216 aa19.23■□□□□ 0.67
CHTOP-203ENST00000368690 ORC4O43929 436 aa19.22■□□□□ 0.67
CHTOP-203ENST00000368690 CXCR5P32302 372 aa19.22■□□□□ 0.67
Retrieved 100 of 20,778 RNA–protein pairs in 19 ms