RNA–Protein interactions for RNA: ENST00000368671.3

CLRN3-201, Transcript of clarin 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CLRN3, Length 1,152 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN3-201ENST00000368671 B4DLN1 442 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 NKRFO15226 690 aaKnown RBP eCLIP12.11□□□□□ -0.47
CLRN3-201ENST00000368671 KDM4AO75164 1064 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 TXNP10599 105 aaKnown RBP12.11□□□□□ -0.47
CLRN3-201ENST00000368671 EDNRBP24530 442 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 MRPL12P52815 198 aaKnown RBP12.11□□□□□ -0.47
CLRN3-201ENST00000368671 CHMP4BP1P59074 171 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 ADGRE1Q14246 886 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 CCDC85BQ15834 202 aaPredicted RBP12.11□□□□□ -0.47
CLRN3-201ENST00000368671 CDC37Q16543 378 aaPredicted RBP12.11□□□□□ -0.47
CLRN3-201ENST00000368671 NBPF20Q3BBV1 942 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 TJAP1Q5JTD0 557 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 POTEBQ6S5H4 581 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 CHD1LQ86WJ1 897 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 DGKHQ86XP1 1220 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 SMC5Q8IY18 1101 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 PNMA1Q8ND90 353 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 DNERQ8NFT8 737 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 SCFD2Q8WU76 684 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 HS3ST6Q96QI5 342 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 RWDD1Q9H446 243 aaPredicted RBP12.11□□□□□ -0.47
CLRN3-201ENST00000368671 KAT14Q9H8E8 782 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 DIAPH3Q9NSV4 1193 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 MYH6P13533 1939 aa12.11□□□□□ -0.47
CLRN3-201ENST00000368671 FAM205CA6NFA0 338 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 B4E1Z4 1266 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 DHX16O60231 1041 aaKnown RBP12.1□□□□□ -0.47
CLRN3-201ENST00000368671 ARIH2O95376 493 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 IGHDP01880 384 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 MYOGP15173 224 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 TTLL4Q14679 1199 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 PPP2R2DQ66LE6 453 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 IQCA1Q86XH1 822 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 PLEKHM2Q8IWE5 1019 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 TBC1D5Q92609 795 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 YTHDC1Q96MU7 727 aaKnown RBP12.1□□□□□ -0.47
CLRN3-201ENST00000368671 ABCB11O95342 1321 aa12.1□□□□□ -0.47
CLRN3-201ENST00000368671 SCN10AQ9Y5Y9 1956 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 KPNA6O60684 536 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 PFKMP08237 780 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 ATP2A2P16615 1042 aaKnown RBP12.09□□□□□ -0.47
CLRN3-201ENST00000368671 CCDC178Q5BJE1 867 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 SEPT14Q6ZU15 432 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 ADGRF4Q8IZF3 695 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 RETREG2Q8NC44 543 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 VWCEQ96DN2 955 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 TAAR1Q96RJ0 339 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 ZSCAN10Q96SZ4 725 aaPredicted RBP12.09□□□□□ -0.47
CLRN3-201ENST00000368671 VAT1LQ9HCJ6 419 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 COL20A1Q9P218 1284 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 THEGQ9P2T0 379 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 NOD1Q9Y239 953 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 PCDHA11Q9Y5I1 949 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 KIAA1217Q5T5P2 1943 aa12.09□□□□□ -0.47
CLRN3-201ENST00000368671 A6NJR5 290 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 HIP1O00291 1037 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 ACTN1P12814 892 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 NUCB1Q02818 461 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 IMMTQ16891 758 aaKnown RBP12.08□□□□□ -0.48
CLRN3-201ENST00000368671 LY6KQ17RY6 165 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 QRICH1Q2TAL8 776 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 ASPRV1Q53RT3 343 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 NFRKBQ6P4R8 1299 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 CHST3Q7LGC8 479 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 MICALL1Q8N3F8 863 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 RGS22Q8NE09 1264 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 SYTL5Q8TDW5 730 aaPredicted RBP12.08□□□□□ -0.48
CLRN3-201ENST00000368671 FTOQ9C0B1 505 aaKnown RBP eCLIP12.08□□□□□ -0.48
CLRN3-201ENST00000368671 OSBPL3Q9H4L5 887 aa12.08□□□□□ -0.48
CLRN3-201ENST00000368671 GH1P01241 217 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 MMP3P08254 477 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 PARP1P09874 1014 aaKnown RBP12.07□□□□□ -0.48
CLRN3-201ENST00000368671 IQCF3P0C7M6 154 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 RFC2P35250 354 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 NT5C2P49902 561 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 PTPN11Q06124 597 aaPredicted RBP12.07□□□□□ -0.48
CLRN3-201ENST00000368671 BFSP2Q13515 415 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 AAMPQ13685 434 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 TMEM67Q5HYA8 995 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 ARHGEF16Q5VV41 709 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 FBXO11Q86XK2 927 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 MCF2L2Q86YR7 1114 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 ENAHQ8N8S7 591 aaPredicted RBP12.07□□□□□ -0.48
CLRN3-201ENST00000368671 EXOC6Q8TAG9 804 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 NSUN6Q8TEA1 469 aaKnown RBP12.07□□□□□ -0.48
CLRN3-201ENST00000368671 AFG1LQ8WV93 481 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 ATXN2LQ8WWM7 1075 aaKnown RBP12.07□□□□□ -0.48
CLRN3-201ENST00000368671 ANKS1AQ92625 1134 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 DSCC1Q9BVC3 393 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 CERS4Q9HA82 394 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 ZSWIM5Q9P217 1185 aa12.07□□□□□ -0.48
CLRN3-201ENST00000368671 MRPL11Q9Y3B7 192 aaKnown RBP12.07□□□□□ -0.48
CLRN3-201ENST00000368671 UNC80Q8N2C7 3258 aa12.06□□□□□ -0.48
CLRN3-201ENST00000368671 EYSQ5T1H1 3165 aa12.06□□□□□ -0.48
CLRN3-201ENST00000368671 LAMA2P24043 3122 aaKnown RBP12.06□□□□□ -0.48
CLRN3-201ENST00000368671 TNFRSF10AO00220 468 aa12.06□□□□□ -0.48
CLRN3-201ENST00000368671 RFXAPO00287 272 aa12.06□□□□□ -0.48
CLRN3-201ENST00000368671 CFBP00751 764 aa12.06□□□□□ -0.48
CLRN3-201ENST00000368671 CA3P07451 260 aa12.06□□□□□ -0.48
CLRN3-201ENST00000368671 EIF2AK2P19525 551 aaKnown RBP12.06□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 25.6 ms