RNA–Protein interactions for RNA: ENST00000368545.7

TPM3-213, Transcript of tropomyosin 3, humanhuman

TSL 1 (best)

Gene TPM3, Length 2,147 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM3-213ENST00000368545 UBXN2AP68543 259 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 IGBP1P78318 339 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 APOBRQ0VD83 1088 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 CD99L2Q8TCZ2 262 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 ESR2Q92731 530 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 PGPEP1Q9NXJ5 209 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 USP20Q9Y2K6 914 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 MYH1P12882 1939 aa10.15□□□□□ -0.78
TPM3-213ENST00000368545 B4E1Z4 1266 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 GOLGA6L22H0YM25 854 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 PSMD14O00487 310 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 STK3Q13188 491 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 STRIP1Q5VSL9 837 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 CTR9Q6PD62 1173 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 CHST3Q7LGC8 479 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 NECAB1Q8N987 351 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 NIFKQ9BYG3 293 aaKnown RBP10.15□□□□□ -0.79
TPM3-213ENST00000368545 ZFYVE28Q9HCC9 887 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 KIF3AQ9Y496 699 aa10.15□□□□□ -0.79
TPM3-213ENST00000368545 MYO3BQ8WXR4 1341 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 ROBO3Q96MS0 1386 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 SSC5DA1L4H1 1573 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 MINDY4BA8MYZ0 360 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 TNFRSF10AO00220 468 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 SH2B2O14492 632 aaPredicted RBP10.14□□□□□ -0.79
TPM3-213ENST00000368545 DHX16O60231 1041 aaKnown RBP10.14□□□□□ -0.79
TPM3-213ENST00000368545 ECE2O60344 883 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 LIFRP42702 1097 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 BTDP43251 543 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 HMGN5P82970 282 aaKnown RBP10.14□□□□□ -0.79
TPM3-213ENST00000368545 SCRN1Q12765 414 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 PKP1Q13835 747 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 GRIK5Q16478 980 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 SPON2Q9BUD6 331 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 BCO2Q9BYV7 579 aa10.14□□□□□ -0.79
TPM3-213ENST00000368545 ERICH2A1L162 156 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 STX6O43752 255 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 SSBP05455 408 aaKnown RBP eCLIP10.13□□□□□ -0.79
TPM3-213ENST00000368545 PDIA3P30101 505 aaKnown RBP10.13□□□□□ -0.79
TPM3-213ENST00000368545 CBLBQ13191 982 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 CYB5R4Q7L1T6 521 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 SGMS1Q86VZ5 419 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 TMTC2Q8N394 836 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 SH3RF3Q8TEJ3 882 aaPredicted RBP10.13□□□□□ -0.79
TPM3-213ENST00000368545 SNX29Q8TEQ0 813 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 TOMM22Q9NS69 142 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 ZDHHC9Q9Y397 364 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 KLF18A0A0U1RQI7 1052 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 GOLGA8BA8MQT2 603 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 MEN1O00255 615 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 ORC4O43929 436 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 POLR3DP05423 398 aaPredicted RBP10.13□□□□□ -0.79
TPM3-213ENST00000368545 SYT1P21579 422 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 PDE4BQ07343 736 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 TMEM67Q5HYA8 995 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 ANKLE1Q8NAG6 615 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 SEC16BQ96JE7 1060 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 DBNDD1Q9H9R9 158 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 MCM9Q9NXL9 1143 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 ZSWIM5Q9P217 1185 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 ATP6V1DQ9Y5K8 247 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 NID2Q14112 1375 aa10.13□□□□□ -0.79
TPM3-213ENST00000368545 UBE2Q2LH0YL09 131 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 IFIT3O14879 490 aaKnown RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 FARP2O94887 1054 aaPredicted RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 BAG4O95429 457 aaKnown RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 RCAN1P53805 252 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 RRP12Q5JTH9 1297 aaKnown RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 ANGEL2Q5VTE6 544 aaKnown RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 HHIPL2Q6UWX4 724 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 XKR5Q6UX68 686 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 CERS5Q8N5B7 392 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 SMARCC2Q8TAQ2 1214 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 IGDCC4Q8TDY8 1250 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 TEKT1Q969V4 418 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 TRIM47Q96LD4 638 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 GDF15Q99988 308 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 MRIQ9BWK5 157 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 LY9Q9HBG7 655 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 ADAMTS1Q9UHI8 967 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 NAP1L2Q9ULW6 460 aaPredicted RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 TTF2Q9UNY4 1162 aaKnown RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.12□□□□□ -0.79
TPM3-213ENST00000368545 DAGLAQ9Y4D2 1042 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 CCDC69A6NI79 296 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 YDJCA8MPS7 323 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 ZSCAN22P10073 491 aaPredicted RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 ETFBP38117 255 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 NASPP49321 788 aaPredicted RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 WTAPQ15007 396 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 TRIP4Q15650 581 aaPredicted RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 APOA5Q6Q788 366 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 NFXL1Q6ZNB6 911 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 ZNF438Q7Z4V0 828 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 IQCA1Q86XH1 822 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 TEX11Q8IYF3 940 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 NSUN7Q8NE18 718 aaKnown RBP10.12□□□□□ -0.79
TPM3-213ENST00000368545 TGFBRAP1Q8WUH2 860 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 WNK4Q96J92 1243 aa10.12□□□□□ -0.79
TPM3-213ENST00000368545 ZSCAN10Q96SZ4 725 aaPredicted RBP10.12□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms