RNA–Protein interactions for RNA: ENST00000368436.1

CKS1B-202, Transcript of CDC28 protein kinase regulatory subunit 1B, humanhuman

TSL 2 BASIC

Gene CKS1B, Length 820 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CKS1B-202ENST00000368436 EIF2AK2P19525 551 aaKnown RBP18.65■□□□□ 0.58
CKS1B-202ENST00000368436 BFSP2Q13515 415 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 KAT2BQ92831 832 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 EMID1Q96A84 441 aaPredicted RBP18.65■□□□□ 0.58
CKS1B-202ENST00000368436 CTAGE1Q96RT6 745 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 TET1Q8NFU7 2136 aa18.65■□□□□ 0.58
CKS1B-202ENST00000368436 SPTBN5Q9NRC6 3674 aaKnown RBP18.64■□□□□ 0.57
CKS1B-202ENST00000368436 PPP1R11O60927 126 aaPredicted RBP18.64■□□□□ 0.57
CKS1B-202ENST00000368436 NR3C2P08235 984 aa18.64■□□□□ 0.57
CKS1B-202ENST00000368436 ACTN1P12814 892 aa18.64■□□□□ 0.57
CKS1B-202ENST00000368436 MYOGP15173 224 aa18.64■□□□□ 0.57
CKS1B-202ENST00000368436 CASTP20810 708 aaKnown RBP18.64■□□□□ 0.57
CKS1B-202ENST00000368436 PTGISQ16647 500 aa18.64■□□□□ 0.57
CKS1B-202ENST00000368436 SAMD3Q8N6K7 520 aa18.64■□□□□ 0.57
CKS1B-202ENST00000368436 PRDM6Q9NQX0 595 aa18.64■□□□□ 0.57
CKS1B-202ENST00000368436 PTPRSQ13332 1948 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 ZBTB5O15062 677 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 CYP21A2P08686 494 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 TRDNQ13061 729 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 DGKDQ16760 1214 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 TJAP1Q5JTD0 557 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 PPP2R2DQ66LE6 453 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 GDF6Q6KF10 455 aaPredicted RBP18.63■□□□□ 0.57
CKS1B-202ENST00000368436 STOX1Q6ZVD7 989 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 CHST3Q7LGC8 479 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 PHOSPHO2Q8TCD6 241 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 RUFY2Q8WXA3 655 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 PPM1EQ8WY54 764 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 SLC9A7Q96T83 725 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 NOD1Q9Y239 953 aa18.63■□□□□ 0.57
CKS1B-202ENST00000368436 CHMLP26374 656 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 CHMP4BP1P59074 171 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 PTH1RQ03431 593 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 LAMC2Q13753 1193 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 GRM4Q14833 912 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 SLC35G1Q2M3R5 365 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 CAGE1Q8TC20 777 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 AFAP1L1Q8TED9 768 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 ATXN2LQ8WWM7 1075 aaKnown RBP18.62■□□□□ 0.57
CKS1B-202ENST00000368436 PDCD2LQ9BRP1 358 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 RIOX1Q9H6W3 641 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 GTF2IRD1Q9UHL9 959 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 SUPT16HQ9Y5B9 1047 aaKnown RBP18.62■□□□□ 0.57
CKS1B-202ENST00000368436 PCDHA1Q9Y5I3 950 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 MRVI1Q9Y6F6 885 aa18.62■□□□□ 0.57
CKS1B-202ENST00000368436 U3KPZ7 1027 aaPredicted RBP18.62■□□□□ 0.57
CKS1B-202ENST00000368436 BAZ2BQ9UIF8 2168 aaKnown RBP18.62■□□□□ 0.57
CKS1B-202ENST00000368436 HAS3O00219 553 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 RGS20O76081 388 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 IGFBP4P22692 258 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 RBL2Q08999 1139 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 GPNMBQ14956 572 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 TMEM67Q5HYA8 995 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 VSIG10LQ86VR7 867 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 CCDC155Q8N6L0 562 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 PPTC7Q8NI37 304 aa18.61■□□□□ 0.57
CKS1B-202ENST00000368436 FTOQ9C0B1 505 aaKnown RBP eCLIP18.61■□□□□ 0.57
CKS1B-202ENST00000368436 IFIT3O14879 490 aaKnown RBP18.6■□□□□ 0.57
CKS1B-202ENST00000368436 BAIAP3O94812 1187 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 F2P00734 622 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 HOXD8P13378 290 aaPredicted RBP18.6■□□□□ 0.57
CKS1B-202ENST00000368436 PSEN2P49810 448 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 TROAPQ12815 778 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 TRAF1Q13077 416 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 PGM5Q15124 567 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 MYSM1Q5VVJ2 828 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 KCNV1Q6PIU1 500 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 DHX37Q8IY37 1157 aaKnown RBP18.6■□□□□ 0.57
CKS1B-202ENST00000368436 DHX38Q92620 1227 aaKnown RBP18.6■□□□□ 0.57
CKS1B-202ENST00000368436 KATNAL1Q9BW62 490 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 SENP2Q9HC62 589 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 HDAC6Q9UBN7 1215 aa18.6■□□□□ 0.57
CKS1B-202ENST00000368436 E7EWF7 191 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 CYTH3O43739 400 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 PPFIA4O75335 1185 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 CA3P07451 260 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 MYCLP12524 364 aaPredicted RBP18.59■□□□□ 0.57
CKS1B-202ENST00000368436 SELPP16109 830 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 POU3F3P20264 500 aaPredicted RBP18.59■□□□□ 0.57
CKS1B-202ENST00000368436 HOXA13P31271 388 aaPredicted RBP18.59■□□□□ 0.57
CKS1B-202ENST00000368436 CCDC85BQ15834 202 aaPredicted RBP18.59■□□□□ 0.57
CKS1B-202ENST00000368436 HERC6Q8IVU3 1022 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 PIGSQ96S52 555 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 THEGQ9P2T0 379 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 TAF6LQ9Y6J9 622 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 CHD7Q9P2D1 2997 aa18.59■□□□□ 0.57
CKS1B-202ENST00000368436 ERICH2A1L162 156 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 GCOM1H8Y6P7 765 aaPredicted RBP18.58■□□□□ 0.56
CKS1B-202ENST00000368436 SGSM2O43147 1006 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 PARNO95453 639 aaKnown RBP18.58■□□□□ 0.56
CKS1B-202ENST00000368436 POLR2MP0CAP2 368 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 TGFB3P10600 412 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 MFSD10Q14728 455 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 WTAPQ15007 396 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 CELF3Q5SZQ8 465 aaKnown RBP18.58■□□□□ 0.56
CKS1B-202ENST00000368436 LRRC8DQ7L1W4 858 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 HOMER1Q86YM7 354 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 C7orf31Q8N865 590 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 NCOA7Q8NI08 942 aa18.58■□□□□ 0.56
CKS1B-202ENST00000368436 IL31RAQ8NI17 732 aa18.58■□□□□ 0.56
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms