RNA–Protein interactions for RNA: ENST00000368147.8

SPTA1-201, Transcript of spectrin alpha, erythrocytic 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SPTA1, Length 7,999 nt, Biotype protein coding, Subcellular localisation Cytosol, Dendrite .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPTA1-201ENST00000368147 PNMA3Q9UL41 463 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 DYNLT1P63172 113 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 SFMBT2Q5VUG0 894 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 PHLDB3Q6NSJ2 640 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 SCN4BQ8IWT1 228 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 DPF3Q92784 378 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 KDM5CP41229 1560 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 KDM3AQ9Y4C1 1321 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 PDE6CP51160 858 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 KLHL30Q0D2K2 578 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 PRPSAP1Q14558 356 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 RFX6Q8HWS3 928 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 FAM149B1Q96BN6 582 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 MASTLQ96GX5 879 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 CEP170P1Q96L14 293 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 TBC1D32Q96NH3 1257 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 RAB20Q9NX57 234 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 MAP10Q9P2G4 905 aa7.7□□□□□ -1.18
SPTA1-201ENST00000368147 HNRNPDLO14979 420 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 SYDE2Q5VT97 1194 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 FASTKD5Q7L8L6 764 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 SPDL1Q96EA4 605 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 ATP8A2Q9NTI2 1148 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 SEC23IPQ9Y6Y8 1000 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 HNRNPCL2B2RXH8 293 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 HNRNPCL1O60812 293 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 HEXIM1O94992 359 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 CCDC159P0C7I6 412 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 CACNB2Q08289 660 aaPredicted RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 CDO1Q16878 200 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 RNF219Q5W0B1 726 aaPredicted RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 DDX42Q86XP3 938 aaKnown RBP eCLIP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 YAF2Q8IY57 180 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 KBTBD3Q8NAB2 608 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 MAD1L1Q9Y6D9 718 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 KIF11P52732 1056 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 CDC37L1Q7L3B6 337 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 CCNYQ8ND76 341 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 GJA10Q969M2 543 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 BAG5Q9UL15 447 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 ZNF202O95125 648 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 RPAINQ86UA6 219 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 MCUQ8NE86 351 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 MMTAG2Q9BU76 263 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 CEP170Q5SW79 1584 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 H7C0C1 242 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 OPHN1O60890 802 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 DDIT3P35638 169 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 ATP5OP48047 213 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 HP1BP3Q5SSJ5 553 aaPredicted RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 FAM83BQ5T0W9 1011 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 FAM76AQ8TAV0 307 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 RBSNQ9H1K0 784 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 S100BP04271 92 aaPredicted RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 LONRF2Q1L5Z9 754 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 RILPL1Q5EBL4 403 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 PDXDC2PQ6P474 469 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 HEXIM2Q96MH2 286 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 SERTAD1Q9UHV2 236 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 ZCCHC11Q5TAX3 1644 aaKnown RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 SFI1A8K8P3 1242 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 PRKAB2O43741 272 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 MUM1Q2TAK8 710 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 VWA3BQ502W6 1294 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 MFSD14CQ5VZR4 134 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 SH3RF3Q8TEJ3 882 aaPredicted RBP7.69□□□□□ -1.18
SPTA1-201ENST00000368147 HDAC11Q96DB2 347 aa7.69□□□□□ -1.18
SPTA1-201ENST00000368147 GOLGA8SH3BPF8 625 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 NEMP1O14524 444 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 XRCC5P13010 732 aaKnown RBP7.68□□□□□ -1.18
SPTA1-201ENST00000368147 CYP26C1Q6V0L0 522 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 WDR48Q8TAF3 677 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 DCTPP1Q9H773 170 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 GOLGA8IPA6NC78 632 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 GOLGA8JA6NMD2 632 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 PDE6AP16499 860 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 CNGA4Q8IV77 575 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 URGCPQ8TCY9 931 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 RNF139Q8WU17 664 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 SLC8A2Q9UPR5 921 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 RIPOR2Q9Y4F9 1068 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 BLMP54132 1417 aaPredicted RBP7.68□□□□□ -1.18
SPTA1-201ENST00000368147 TXNDC9O14530 226 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 HSPA8P11142 646 aaKnown RBP7.68□□□□□ -1.18
SPTA1-201ENST00000368147 SLC9C1Q4G0N8 1177 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 KRT40Q6A162 431 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 HSPH1Q92598 858 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 MRPL46Q9H2W6 279 aaKnown RBP7.68□□□□□ -1.18
SPTA1-201ENST00000368147 SGK1O00141 431 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 MX2P20592 715 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 CRKP46108 304 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 MYL7Q01449 175 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 SNX1Q13596 522 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 DCAF4L1Q3SXM0 396 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 ODR4Q5SWX8 454 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 TWF2Q6IBS0 349 aaKnown RBP7.68□□□□□ -1.18
SPTA1-201ENST00000368147 PEX26Q7Z412 305 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 NUDCD3Q8IVD9 361 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 EPS15L1Q9UBC2 864 aa7.68□□□□□ -1.18
SPTA1-201ENST00000368147 SLC12A6Q9UHW9 1150 aa7.68□□□□□ -1.18
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms