RNA–Protein interactions for RNA: ENST00000367279.8

PTPN7-202, Transcript of protein tyrosine phosphatase, non-receptor type 7, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPN7, Length 3,265 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN7-202ENST00000367279 COL16A1Q07092 1604 aaPredicted RBP13.68□□□□□ -0.22
PTPN7-202ENST00000367279 KRT18P05783 430 aaKnown RBP13.68□□□□□ -0.22
PTPN7-202ENST00000367279 TRIM58Q8NG06 486 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 HDAC7Q8WUI4 952 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 TSGA10Q9BZW7 698 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 BLOC1S4Q9NUP1 217 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 LAMB1P07942 1786 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 CNTNAP4Q9C0A0 1308 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 EPS15P42566 896 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 MAN2A1Q16706 1144 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 TRAPPC3LQ5T215 181 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 C16orf86Q6ZW13 317 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 KCNK18Q7Z418 384 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 PNMA5Q96PV4 448 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 LRRC1Q9BTT6 524 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 MED4Q9NPJ6 270 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 HPCAL4Q9UM19 191 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 ROBO1Q9Y6N7 1651 aa13.68□□□□□ -0.22
PTPN7-202ENST00000367279 FGFR1OPO95684 399 aaKnown RBP13.67□□□□□ -0.22
PTPN7-202ENST00000367279 UNC13DQ70J99 1090 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 ERGIC2Q96RQ1 377 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 TULP1O00294 542 aaPredicted RBP13.67□□□□□ -0.22
PTPN7-202ENST00000367279 PPP4CP60510 307 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 GTF2IP78347 998 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 APBA1Q02410 837 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 PTPROQ16827 1216 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 GGA1Q9UJY5 639 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 KIAA1551Q9HCM1 1747 aa13.67□□□□□ -0.22
PTPN7-202ENST00000367279 KDM4FA0A1W2PPD8 638 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 FAM170AA1A519 330 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 VGLL3A8MV65 326 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 PPP1R2P41236 205 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 PAFAH1B1P43034 410 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 TTBK2Q6IQ55 1244 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 RPGRIP1Q96KN7 1286 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 PSD3Q9NYI0 1048 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 SNX12Q9UMY4 172 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 JRKLQ9Y4A0 524 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 GOLGA6BA6NDN3 693 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 SLURP2P0DP57 97 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 PDHBP11177 359 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 AKR1B1P15121 316 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 TTC19Q6DKK2 380 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 CENPPQ6IPU0 288 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 FAM196AQ6ZSG2 479 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 KCTD1Q719H9 257 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 RUFY1Q96T51 708 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 RRP15Q9Y3B9 282 aaKnown RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 SYF2O95926 243 aaKnown RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 SLC1A4P43007 532 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 RAPGEF1Q13905 1077 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 MUM1L1Q5H9M0 696 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 CCNI2Q6ZMN8 369 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 CCDC84Q86UT8 332 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 RAD54LQ92698 747 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 MS4A14Q96JA4 679 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 SH2D4AQ9H788 454 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 BMP2KQ9NSY1 1161 aaPredicted RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 DDX25Q9UHL0 483 aaKnown RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 DMGDHQ9UI17 866 aaKnown RBP13.66□□□□□ -0.22
PTPN7-202ENST00000367279 PLAGL2Q9UPG8 496 aa13.66□□□□□ -0.22
PTPN7-202ENST00000367279 NPHP3-ACAD11A0A0J9YXS1 232 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 ANO9A1A5B4 782 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 MYO1CO00159 1063 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 POLR2FP61218 127 aaKnown RBP13.65□□□□□ -0.22
PTPN7-202ENST00000367279 PPP1R3FQ6ZSY5 799 aaPredicted RBP13.65□□□□□ -0.22
PTPN7-202ENST00000367279 BARGINQ6ZT62 677 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 MYOCDQ8IZQ8 938 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 OSBPL9Q96SU4 736 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 LSM14BQ9BX40 385 aaKnown RBP13.65□□□□□ -0.22
PTPN7-202ENST00000367279 E9PMD0 336 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 IVLP07476 585 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 PLCG2P16885 1265 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 PPARDQ03181 441 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 PANK4Q9NVE7 773 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 STK17AQ9UEE5 414 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 SIK3Q9Y2K2 1263 aa13.65□□□□□ -0.22
PTPN7-202ENST00000367279 SCNN1DP51172 638 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 ZSCAN29Q8IWY8 852 aaPredicted RBP13.65□□□□□ -0.23
PTPN7-202ENST00000367279 SPATA4Q8NEY3 305 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 IFT81Q8WYA0 676 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 POLD4Q9HCU8 107 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 PCDHA12Q9UN75 941 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 KIAA1024Q9UPX6 916 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 HYOU1Q9Y4L1 999 aa13.65□□□□□ -0.23
PTPN7-202ENST00000367279 MYH1P12882 1939 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 ROBO3Q96MS0 1386 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 GPR75-ASB3A0A0A6YYF3 556 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 GOLGA6CA6NDK9 693 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 FTCDO95954 541 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 GOLGA6DP0CG33 693 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 HERC4Q5GLZ8 1057 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-202ENST00000367279 C8orf74Q6P047 294 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 CREG2Q8IUH2 290 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 GUF1Q8N442 669 aaKnown RBP13.64□□□□□ -0.23
PTPN7-202ENST00000367279 BBXQ8WY36 941 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-202ENST00000367279 GOLGA6AQ9NYA3 693 aa13.64□□□□□ -0.23
PTPN7-202ENST00000367279 FEZ2Q9UHY8 353 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-202ENST00000367279 PACSIN2Q9UNF0 486 aaPredicted RBP13.64□□□□□ -0.23
PTPN7-202ENST00000367279 COL22A1Q8NFW1 1626 aaPredicted RBP13.64□□□□□ -0.23
Retrieved 100 of 20,778 RNA–protein pairs in 57 ms