RNA–Protein interactions for RNA: ENST00000362378.1

RNU6-28P-201, Transcript of RNA, U6 small nuclear 28, pseudogene, humanhuman

BASIC

Gene RNU6-28P, Length 107 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-28P-201ENST00000362378 LACTBP83111 547 aaPredicted RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 FAM50AQ14320 339 aaKnown RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 SKOR2Q2VWA4 1001 aaPredicted RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 ODR4Q5SWX8 454 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 SPATS2Q86XZ4 545 aaKnown RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 STK11IPQ8N1F8 1099 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 CHST14Q8NCH0 376 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 SMC1BQ8NDV3 1235 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 PANK1Q8TE04 598 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 MAP6Q96JE9 813 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 SPOCK3Q9BQ16 436 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 PUS7LQ9H0K6 701 aaKnown RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 CABP5Q9NP86 173 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 SLC5A4Q9NY91 659 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 FBXL7Q9UJT9 491 aa5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 APOBEC2Q9Y235 224 aaKnown RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 THRAP3Q9Y2W1 955 aaKnown RBP5.14□□□□□ -1.59
RNU6-28P-201ENST00000362378 A0A1W2PQ45 241 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 A0A1W2PQY0 241 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 ZNF891A8MT65 544 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 PPP1R11O60927 126 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 PYGMP11217 842 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 ADCYAP1R1P41586 468 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 KIR2DL1P43626 348 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 KIR2DL2P43627 348 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 ARHGAP44Q17R89 818 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 HABP4Q5JVS0 413 aaKnown RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 OTOP1Q7RTM1 612 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 SLCO6A1Q86UG4 719 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 NLRP10Q86W26 655 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 NXPE1Q8N323 547 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 SYTL4Q96C24 671 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 HHIPL1Q96JK4 782 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 ASPSCR1Q9BZE9 553 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 BSDC1Q9NW68 430 aaPredicted RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 CLDND1Q9NY35 253 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 CBLCQ9ULV8 474 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 G3BP2Q9UN86 482 aaKnown RBP5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 ZKSCAN5Q9Y2L8 839 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 X6R8D5 127 aa5.13□□□□□ -1.59
RNU6-28P-201ENST00000362378 WTIPA6NIX2 430 aaPredicted RBP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 GAS7O60861 476 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 KATNA1O75449 491 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 FKBP9O95302 570 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 TGFB1P01137 390 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 YBX3P16989 372 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 ID4P47928 161 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 LSSP48449 732 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 DNM2P50570 870 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 CORO7P57737 925 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 ST5P78524 1137 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 DUSP4Q13115 394 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 IKZF1Q13422 519 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 MTMR1Q13613 665 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 SART3Q15020 963 aaKnown RBP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 INTS5Q6P9B9 1019 aaKnown RBP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 FKBP9P1Q75LS8 142 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 BCL7CQ8WUZ0 217 aaPredicted RBP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 JDP2Q8WYK2 163 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 TMEM169Q96HH4 297 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 CHAMP1Q96JM3 812 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 JMJD8Q96S16 334 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 MTA3Q9BTC8 594 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 KRTAP17-1Q9BYP8 105 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 KRTAP4-2Q9BYR5 136 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 CARS2Q9HA77 564 aaKnown RBP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 GOLGA2P5Q9HBQ8 144 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 CRTAC1Q9NQ79 661 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 CHPF2Q9P2E5 772 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 EBF1Q9UH73 591 aa5.12□□□□□ -1.59
RNU6-28P-201ENST00000362378 PTPDC1A2A3K4 754 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 ZNF561-AS1K7EIQ3 104 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 K7ESF4 209 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 ALDH1L1O75891 902 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 PRNPP04156 253 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 ZGLP1P0C6A0 271 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 ATP2A2P16615 1042 aaKnown RBP5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 OCRLQ01968 901 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 BNIP3Q12983 259 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 GPR19Q15760 415 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 CRY1Q16526 586 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 CCDC181Q5TID7 509 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 CREB3L3Q68CJ9 461 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 CEP68Q76N32 757 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 WFDC3Q8IUB2 231 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 RIOX2Q8IUF8 465 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 PLEKHO2Q8TD55 490 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 ASIC4Q96FT7 647 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 JAM3Q9BX67 310 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 CATSPERZQ9NTU4 200 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 GULP1Q9UBP9 304 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 EID1Q9Y6B2 187 aa5.11□□□□□ -1.59
RNU6-28P-201ENST00000362378 PDE6AP16499 860 aa5.1□□□□□ -1.59
RNU6-28P-201ENST00000362378 GRIK1P39086 918 aa5.1□□□□□ -1.59
RNU6-28P-201ENST00000362378 EPHB1P54762 984 aa5.1□□□□□ -1.59
RNU6-28P-201ENST00000362378 IL2P60568 153 aa5.1□□□□□ -1.59
RNU6-28P-201ENST00000362378 TMPRSS15P98073 1019 aa5.1□□□□□ -1.59
RNU6-28P-201ENST00000362378 FAPQ12884 760 aa5.1□□□□□ -1.59
RNU6-28P-201ENST00000362378 TTF1Q15361 905 aaPredicted RBP5.1□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 13.5 ms