RNA–Protein interactions for RNA: ENST00000361354.8

NCKAP1-202, Transcript of NCK associated protein 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NCKAP1, Length 20,347 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKAP1-202ENST00000361354 COPB1P53618 953 aaKnown RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 KIF23Q02241 960 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 CASKIN1Q8WXD9 1431 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 PHLPP2Q6ZVD8 1323 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 H0Y3Z8 333 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 ANKLE2Q86XL3 938 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 RFX6Q8HWS3 928 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 ARHGEF1Q92888 912 aaKnown RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 BTBD6Q96KE9 485 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 ZNF215Q9UL58 517 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 SRGAP2CP0DJJ0 459 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 NDEL1Q9GZM8 345 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 SMYD3Q9H7B4 428 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 KIF9Q9HAQ2 790 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 AARS2Q5JTZ9 985 aaKnown RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 PIK3CAP42336 1068 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 AARSP49588 968 aaKnown RBP eCLIP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 IGBP1P78318 339 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 B4GALNT2Q8NHY0 566 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 TRIM63Q969Q1 353 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 ZMYND12Q9H0C1 365 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 LDHBP07195 334 aaKnown RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 PPHLN1Q8NEY8 458 aaKnown RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 PARVBQ9HBI1 364 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 APOBEC2Q9Y235 224 aaKnown RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 PTPN23Q9H3S7 1636 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 SOS2Q07890 1332 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 ZSCAN9O15535 394 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 C16orf71Q8IYS4 520 aaPredicted RBP9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 AHI1Q8N157 1196 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 NEK9Q8TD19 979 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 LMCD1Q9NZU5 365 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 SLC52A1Q9NWF4 448 aa9.07□□□□□ -0.96
NCKAP1-202ENST00000361354 F8W031 263 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 KCNA1Q09470 495 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 NLRP4Q96MN2 994 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 RRAGDQ9NQL2 400 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 UBXN8O00124 270 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 PJA2O43164 708 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CDH2P19022 906 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 BFSP2Q13515 415 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CUL1Q13616 776 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 IVNS1ABPQ9Y6Y0 642 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CYP2J2P51589 502 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 REXO1Q8N1G1 1221 aaKnown RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 DONSONQ9NYP3 566 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 KIF14Q15058 1648 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 AFAP1Q8N556 730 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 PKD2L2Q9NZM6 624 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 MEIS1O00470 390 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 RXRAP19793 462 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 NUP62P37198 522 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 NR1H3Q13133 447 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 SPARCL1Q14515 664 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 SNRPA1P09661 255 aaKnown RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 PLS3P13797 630 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 C16orf72Q14CZ0 275 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ARHGAP45Q92619 1136 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 SPATA17Q96L03 361 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 SYBUQ9NX95 663 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ARMCX3Q9UH62 379 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CCDC61Q9Y6R9 512 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 SOS1Q07889 1333 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 NINQ8N4C6 2090 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ATP5J2-PTCD1G3V325 749 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CCDC151A5D8V7 595 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ZNF233A6NK53 670 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 PAPOLBQ9NRJ5 636 aaKnown RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 KDRP35968 1356 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 KNL1Q8NG31 2342 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CYP4F22Q6NT55 531 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 AOC3Q16853 763 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 BTNL9Q6UXG8 535 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 AGBL1Q96MI9 1066 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 NSMCE4AQ9NXX6 385 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 SLC44A4Q53GD3 710 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 KRT39Q6A163 491 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 EDEM3Q9BZQ6 932 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ASCC2Q9H1I8 757 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ANP32DO95626 131 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 MMS19Q96T76 1030 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 WDR75Q8IWA0 830 aaKnown RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 HIPK4Q8NE63 616 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ZNF555Q8NEP9 628 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 OSBPL10Q9BXB5 764 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ZNF500O60304 480 aaPredicted RBP9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 MECOMQ03112 1051 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 CUL3Q13618 768 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 ZBTB8OSQ8IWT0 167 aa9.06□□□□□ -0.96
NCKAP1-202ENST00000361354 RPS6KB1P23443 525 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 NNTQ13423 1086 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 SLC30A9Q6PML9 568 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 BTN2A2Q8WVV5 523 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 MAGOHBQ96A72 148 aaKnown RBP9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 VPS39Q96JC1 886 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 FAM81BQ96LP2 452 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 WDR64B1ANS9 1081 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 GRM8O00222 908 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 TEKT4Q8WW24 435 aa9.05□□□□□ -0.96
NCKAP1-202ENST00000361354 PPARGC1AQ9UBK2 798 aaKnown RBP9.05□□□□□ -0.96
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms