RNA–Protein interactions for RNA: ENST00000361138.6

SMC5-201, Transcript of structural maintenance of chromosomes 5, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene SMC5, Length 5,980 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC5-201ENST00000361138 GDAP1Q8TB36 358 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 TRIM49BA6NDI0 452 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 RASGRF2O14827 1237 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 MAP3K21Q5TCX8 1036 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 NFRKBQ6P4R8 1299 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 RASGRP2Q7LDG7 609 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 MAPKAPK5Q8IW41 473 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 MB21D2Q8IYB1 491 aaPredicted RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 SLFN12Q8IYM2 578 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 TSC22D3Q99576 134 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 IRX2Q9BZI1 471 aaPredicted RBP15.21■□□□□ 0.03
SMC5-201ENST00000361138 CXorf56Q9H5V9 222 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 RAB20Q9NX57 234 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 COMMD10Q9Y6G5 202 aa15.21■□□□□ 0.03
SMC5-201ENST00000361138 STRN3Q13033 797 aa15.21■□□□□ 0.02
SMC5-201ENST00000361138 TRPC3Q13507 836 aa15.21■□□□□ 0.02
SMC5-201ENST00000361138 SAAL1Q96ER3 474 aa15.21■□□□□ 0.02
SMC5-201ENST00000361138 GRID2IPA4D2P6 1211 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 MEFVO15553 781 aaPredicted RBP15.2■□□□□ 0.02
SMC5-201ENST00000361138 WDR78Q5VTH9 848 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 ARL6IP4Q66PJ3 421 aaKnown RBP15.2■□□□□ 0.02
SMC5-201ENST00000361138 EYA3Q99504 573 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 EPN3Q9H201 632 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 Q9H521 79 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 GREM2Q9H772 168 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 KLRF2D3W0D1 207 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 N4BP1O75113 896 aaKnown RBP15.2■□□□□ 0.02
SMC5-201ENST00000361138 PDE8BO95263 885 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 GOLGA8HP0CJ92 632 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 A0A1B0GTH6 734 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 ERVV-2B6SEH9 535 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 CAPN12Q6ZSI9 719 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 CYB5R4Q7L1T6 521 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 PLCG1P19174 1290 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 DCUN1D2Q6PH85 259 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 ANKRD35Q8N283 1001 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 DDX17Q92841 729 aaKnown RBP15.2■□□□□ 0.02
SMC5-201ENST00000361138 ECEL1O95672 775 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 ORAI2Q96SN7 254 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 BCAP29Q9UHQ4 241 aa15.2■□□□□ 0.02
SMC5-201ENST00000361138 PDE6CP51160 858 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 PI16Q6UXB8 463 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 GBP7Q8N8V2 638 aaPredicted RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 HNRNPLLQ8WVV9 542 aaKnown RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 STK17AQ9UEE5 414 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 USH1CQ9Y6N9 552 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 FRMPD2Q68DX3 1309 aaPredicted RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 PRCPP42785 496 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 POLE2P56282 527 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 TBC1D10CQ8IV04 446 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 KSR1Q8IVT5 923 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 DNAJC10Q8IXB1 793 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 MMS19Q96T76 1030 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 VCX3AQ9NNX9 186 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 NEDD4P46934 1319 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 NR2F2P24468 414 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 DDX27Q96GQ7 796 aaKnown RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 CCDC188H7C350 402 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 MAP3K7O43318 606 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 NCK2O43639 380 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 HOXA7P31268 230 aaPredicted RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 MAGOHP61326 146 aaKnown RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 FKBP3Q00688 224 aaKnown RBP15.19■□□□□ 0.02
SMC5-201ENST00000361138 GUCY1A3Q02108 690 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 ADCY1Q08828 1119 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 MESDQ14696 234 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 TMED2Q15363 201 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 TPH2Q8IWU9 490 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 TC2NQ8N9U0 490 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 RSAD2Q8WXG1 361 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 PPP1R9AQ9ULJ8 1098 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 ADGRL3Q9HAR2 1447 aa15.19■□□□□ 0.02
SMC5-201ENST00000361138 MYL7Q01449 175 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 PRKAB2O43741 272 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 GFPT1Q06210 699 aaPredicted RBP15.18■□□□□ 0.02
SMC5-201ENST00000361138 PSMD2Q13200 908 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 LCORLQ8N3X6 602 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 ZNF473Q8WTR7 871 aaKnown RBP15.18■□□□□ 0.02
SMC5-201ENST00000361138 SKIP12755 728 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 LRRC63Q05C16 580 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 RABGAP1Q9Y3P9 1069 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 TTC26A0AVF1 554 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 POC1B-GALNT4F8VUJ3 575 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 HSPA6P17066 643 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 NR1I3Q14994 352 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 RNF17Q9BXT8 1623 aaKnown RBP15.18■□□□□ 0.02
SMC5-201ENST00000361138 SART1O43290 800 aaKnown RBP15.18■□□□□ 0.02
SMC5-201ENST00000361138 PFDN1O60925 122 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 EXOSC10Q01780 885 aaKnown RBP15.18■□□□□ 0.02
SMC5-201ENST00000361138 FMR1Q06787 632 aaKnown RBP eCLIP15.18■□□□□ 0.02
SMC5-201ENST00000361138 TUBB6Q9BUF5 446 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 PSTPIP2Q9H939 334 aa15.18■□□□□ 0.02
SMC5-201ENST00000361138 ZNF219Q9P2Y4 722 aaPredicted RBP15.18■□□□□ 0.02
SMC5-201ENST00000361138 ITIH6Q6UXX5 1313 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 USH1GQ495M9 461 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 IL25Q9H293 177 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 DIS3Q9Y2L1 958 aaKnown RBP15.17■□□□□ 0.02
SMC5-201ENST00000361138 OTUD6AQ7L8S5 288 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 REXO1L1PQ8IX06 675 aa15.17■□□□□ 0.02
SMC5-201ENST00000361138 SCYL3Q8IZE3 742 aa15.17■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 14.6 ms