RNA–Protein interactions for RNA: ENST00000360264.7

CUX1-203, Transcript of cut like homeobox 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CUX1, Length 13,762 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-203ENST00000360264 DHTKD1Q96HY7 919 aaPredicted RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 SNCBQ16143 134 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 SPDYE1Q8NFV5 336 aaPredicted RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 XAB2Q9HCS7 855 aaKnown RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 VPS54Q9P1Q0 977 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 SUCLG2Q96I99 432 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 TAF5LO75529 589 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 CIITAP33076 1130 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 FKBP3Q00688 224 aaKnown RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 UBE3CQ15386 1083 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 PPP4R3CPQ6ZMV5 832 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 PDCD7Q8N8D1 485 aaKnown RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 LZICQ8WZA0 190 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 SEC23IPQ9Y6Y8 1000 aaKnown RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 ARHGEF18Q6ZSZ5 1173 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 AFPP02771 609 aaKnown RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 NLRC4Q9NPP4 1024 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 SUCLA2Q9P2R7 463 aaPredicted RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 OAS2P29728 719 aaKnown RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 GSTA4O15217 222 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 PFKFB1P16118 471 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 YWHAGP61981 247 aaKnown RBP eCLIP10.48□□□□□ -0.73
CUX1-203ENST00000360264 TSTA3Q13630 321 aaPredicted RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 TRIM45Q9H8W5 580 aaPredicted RBP10.48□□□□□ -0.73
CUX1-203ENST00000360264 HPCAL4Q9UM19 191 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 PDXDC1Q6P996 788 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 EXOC4Q96A65 974 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 ACCSQ96QU6 501 aa10.48□□□□□ -0.73
CUX1-203ENST00000360264 PSMC2P35998 433 aaKnown RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 MAP2K2P36507 400 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 EFHBQ8N7U6 833 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 UPF3AQ9H1J1 476 aaKnown RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 ABCC12Q96J65 1359 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 A0A1W2PQ27 194 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 A0A1W2PQ64 194 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 A0A1W2PQD8 194 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 FAM98CQ17RN3 349 aaKnown RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 RASEFQ8IZ41 740 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 GANCQ8TET4 914 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 BAIAP2L1Q9UHR4 511 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 INSRP06213 1382 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 ATG16L1Q676U5 607 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 CHMP6Q96FZ7 201 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 SRGAP2CP0DJJ0 459 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 GUCY2FP51841 1108 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 LRRC4Q9HBW1 653 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 PCDHA4Q9UN74 947 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 TMEM232C9JQI7 657 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 SPECC1L-ADORA2AF8WAN1 911 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 PPEF1O14829 653 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 FAM26FQ5R3K3 315 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 ZNF772Q68DY9 489 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 INO80B-WBP1J3KQ70 363 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 MYLK4Q86YV6 388 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 IFNL3Q8IZI9 196 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 INO80BQ9C086 356 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 PRPSAP2O60256 369 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 ABCB4P21439 1286 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 CC2D2BQ6DHV5 1058 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 CNPY4Q8N129 248 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 PRDM1O75626 825 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 RAPH1Q70E73 1250 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 MAGOHBQ96A72 148 aaKnown RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 MTBPQ96DY7 904 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 SUDS3Q9H7L9 328 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 CCDC151A5D8V7 595 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 PTGDRQ13258 359 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 RNF219Q5W0B1 726 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 SIX6OS1Q8N1H7 587 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 PSMB7Q99436 277 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 GPBP1L1Q9HC44 474 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 ZMYM4Q5VZL5 1548 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 GIPC2Q8TF65 315 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 MYO5CQ9NQX4 1742 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 APOEP02649 317 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 CASP2P42575 452 aa10.47□□□□□ -0.73
CUX1-203ENST00000360264 RNF26Q9BY78 433 aaPredicted RBP10.47□□□□□ -0.73
CUX1-203ENST00000360264 SESTD1Q86VW0 696 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 OLA1Q9NTK5 396 aaKnown RBP10.46□□□□□ -0.73
CUX1-203ENST00000360264 MAPK4P31152 587 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 EPHB1P54762 984 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 CXorf38Q8TB03 319 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 CAPS2Q9BXY5 557 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 LRRD1A4D1F6 860 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 CA4P22748 312 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 GJA10Q969M2 543 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 PPME1Q9Y570 386 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 PCCAP05165 728 aaPredicted RBP10.46□□□□□ -0.73
CUX1-203ENST00000360264 ELMOD1Q8N336 334 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 TLK1Q9UKI8 766 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 ADCY9O60503 1353 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 SAT1P21673 171 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 FBLN1P23142 703 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 RIPOR2Q9Y4F9 1068 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 CROCCQ5TZA2 2017 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 YEATS2Q9ULM3 1422 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 KAZNQ674X7 775 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 CCDC138Q96M89 665 aa10.46□□□□□ -0.73
CUX1-203ENST00000360264 MRPL46Q9H2W6 279 aaKnown RBP10.46□□□□□ -0.73
CUX1-203ENST00000360264 SMYD2Q9NRG4 433 aa10.46□□□□□ -0.73
Retrieved 100 of 20,778 RNA–protein pairs in 62.6 ms