RNA–Protein interactions for RNA: ENST00000360168.7

SCNN1A-203, Transcript of sodium channel epithelial 1 alpha subunit, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SCNN1A, Length 3,481 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCNN1A-203ENST00000360168 HAUS3Q68CZ6 603 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 SPTY2D1Q68D10 685 aaPredicted RBP13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 ADAT2Q7Z6V5 191 aaKnown RBP13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 DDX42Q86XP3 938 aaKnown RBP eCLIP13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 EFCAB13Q8IY85 973 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 CCDC170Q8IYT3 715 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 LSM14BQ9BX40 385 aaKnown RBP13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 PACSIN1Q9BY11 444 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 GPCPD1Q9NPB8 672 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 SEC63Q9UGP8 760 aaKnown RBP13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 ADAMTS1Q9UHI8 967 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 LOC102724428A0A0B4J2F2 783 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 MYMKA6NI61 221 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 CAMTA2O94983 1202 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 TDP2O95551 362 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 SIK1P57059 783 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 SNX29Q8TEQ0 813 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 AENQ8WTP8 325 aaKnown RBP13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 TBC1D5Q92609 795 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 NOX5Q96PH1 765 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 NUDT12Q9BQG2 462 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 AP1M1Q9BXS5 423 aa13.54□□□□□ -0.24
SCNN1A-203ENST00000360168 TARSL2A2RTX5 802 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 MEA1Q16626 185 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 CEP85LQ5SZL2 805 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 AMOTL1Q8IY63 956 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 RPGRIP1Q96KN7 1286 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 TMEM47Q9BQJ4 181 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 MYH13Q9UKX3 1938 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 LAMB4A4D0S4 1761 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 COL1A1P02452 1464 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 TNS2Q63HR2 1409 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 A0A087WUV0 522 aaPredicted RBP13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 KCNQ2O43526 872 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 KRT18P05783 430 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 GRIK5Q16478 980 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 CNNM4Q6P4Q7 775 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 LRRC47Q8N1G4 583 aaKnown RBP13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 FAM133AQ8N9E0 248 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 TSGA10Q9BZW7 698 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 TTYH3Q9C0H2 523 aa13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.53□□□□□ -0.24
SCNN1A-203ENST00000360168 EIF3HO15372 352 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 KIAA0753Q2KHM9 967 aa13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 NAA35Q5VZE5 725 aa13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 ZNF622Q969S3 477 aaKnown RBP eCLIP13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 RNPC3Q96LT9 517 aaKnown RBP13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 MAD2L2Q9UI95 211 aa13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 XIRP1Q702N8 1843 aaKnown RBP13.52□□□□□ -0.24
SCNN1A-203ENST00000360168 NPHP3-ACAD11A0A0J9YXS1 232 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 SMIM23A6NLE4 172 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 E7EVH7 732 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 STXBP3O00186 592 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 KCNK3O14649 394 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 AMPD3Q01432 767 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 CALCRLQ16602 461 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 UBE2SQ16763 222 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 SRP68Q9UHB9 627 aaKnown RBP13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 NID2Q14112 1375 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 EPHB4P54760 987 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 IFT88Q13099 833 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 KCNB1Q14721 858 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 TCERG1LQ5VWI1 586 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 NEK8Q86SG6 692 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 FNBP4Q8N3X1 1017 aaPredicted RBP13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 TLR10Q9BXR5 811 aa13.52□□□□□ -0.25
SCNN1A-203ENST00000360168 ANO9A1A5B4 782 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 CEP104O60308 925 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 TCP1P17987 556 aaKnown RBP13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 PICALMQ13492 652 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 CFAP221Q4G0U5 840 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 PARP10Q53GL7 1025 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 MTA3Q9BTC8 594 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 F8W031 263 aaPredicted RBP13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 RPS6KA5O75582 802 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 GUCY2CP25092 1073 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 PRPF4BQ13523 1007 aaKnown RBP13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 UBE4AQ14139 1066 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 KCNK18Q7Z418 384 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 C6orf50Q9HD87 102 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 ARPP21Q9UBL0 812 aaPredicted RBP13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 KLRC1P26715 233 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 RPS8P62241 208 aaKnown RBP13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 TAF4BQ92750 862 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 DDX12PQ92771 950 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 BARHL2Q9NY43 387 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 PLAGL2Q9UPG8 496 aa13.51□□□□□ -0.25
SCNN1A-203ENST00000360168 GOLGA8KD6RF30 607 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 SLC37A4O43826 429 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 LDHBP07195 334 aaKnown RBP13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 ACTN1P12814 892 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 NBPF5PQ86XG9 351 aaPredicted RBP13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 IFT20Q8IY31 132 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 REXO1Q8N1G1 1221 aaKnown RBP13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 UBLCP1Q8WVY7 318 aaPredicted RBP13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 ORC4O43929 436 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 MAN2A1Q16706 1144 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 LARP4BQ92615 738 aaKnown RBP13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 TSG101Q99816 390 aa13.5□□□□□ -0.25
SCNN1A-203ENST00000360168 FGFBP2Q9BYJ0 223 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms