RNA–Protein interactions for RNA: ENST00000358278.7

TPM1-206, Transcript of tropomyosin 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene TPM1, Length 1,717 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-206ENST00000358278 CDKN2AIPQ9NXV6 580 aaPredicted RBP17.36■□□□□ 0.37
TPM1-206ENST00000358278 NOL7Q9UMY1 257 aaKnown RBP17.36■□□□□ 0.37
TPM1-206ENST00000358278 PTPN22Q9Y2R2 807 aa17.36■□□□□ 0.37
TPM1-206ENST00000358278 BRCA2P51587 3418 aa17.36■□□□□ 0.37
TPM1-206ENST00000358278 CYP2C19P33261 490 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 LETM2Q2VYF4 491 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 MFSD14CQ5VZR4 134 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 XRRA1Q6P2D8 792 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 EEPD1Q7L9B9 569 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 VSIG10LQ86VR7 867 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 SLAIN1Q8ND83 568 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 MORC4Q8TE76 937 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 PXYLP1Q8TE99 480 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 PRDM10Q9NQV6 1147 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 CNPY2Q9Y2B0 182 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 STAM2O75886 525 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 HMGCRP04035 888 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 USP11P51784 963 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 NUCB2P80303 420 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 RESTQ13127 1097 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 CRYGNQ8WXF5 182 aa17.35■□□□□ 0.37
TPM1-206ENST00000358278 ZFP91Q96JP5 570 aaPredicted RBP17.35■□□□□ 0.37
TPM1-206ENST00000358278 ZSCAN16Q9H4T2 348 aaPredicted RBP17.35■□□□□ 0.37
TPM1-206ENST00000358278 EIF3JO75822 258 aaKnown RBP17.34■□□□□ 0.37
TPM1-206ENST00000358278 F13A1P00488 732 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 CYP3A4P08684 503 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 ATP2B1P20020 1258 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 GRK4P32298 578 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 DDIT3P35638 169 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 MRPS9P82933 396 aaKnown RBP17.34■□□□□ 0.37
TPM1-206ENST00000358278 GNPTABQ3T906 1256 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 FBXO16Q8IX29 292 aaPredicted RBP17.34■□□□□ 0.37
TPM1-206ENST00000358278 ABHD16BQ9H3Z7 469 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 RTEL1Q9NZ71 1219 aa17.34■□□□□ 0.37
TPM1-206ENST00000358278 BRD1O95696 1058 aa17.33■□□□□ 0.37
TPM1-206ENST00000358278 SNAI1O95863 264 aaPredicted RBP17.33■□□□□ 0.37
TPM1-206ENST00000358278 PKN2Q16513 984 aaKnown RBP17.33■□□□□ 0.37
TPM1-206ENST00000358278 VTA1Q9NP79 307 aa17.33■□□□□ 0.37
TPM1-206ENST00000358278 ZHX1Q9UKY1 873 aaPredicted RBP17.33■□□□□ 0.37
TPM1-206ENST00000358278 CIZ1Q9ULV3 898 aaPredicted RBP17.33■□□□□ 0.37
TPM1-206ENST00000358278 FRMPD3Q5JV73 1810 aa17.33■□□□□ 0.36
TPM1-206ENST00000358278 CCNT1O60563 726 aaKnown RBP17.33■□□□□ 0.36
TPM1-206ENST00000358278 TRAPPC10P48553 1259 aa17.33■□□□□ 0.36
TPM1-206ENST00000358278 SLC9C1Q4G0N8 1177 aa17.33■□□□□ 0.36
TPM1-206ENST00000358278 CEP55Q53EZ4 464 aa17.33■□□□□ 0.36
TPM1-206ENST00000358278 RILPL1Q5EBL4 403 aa17.33■□□□□ 0.36
TPM1-206ENST00000358278 SEPT14Q6ZU15 432 aa17.33■□□□□ 0.36
TPM1-206ENST00000358278 NAP1L4Q99733 375 aaKnown RBP17.33■□□□□ 0.36
TPM1-206ENST00000358278 TDP2O95551 362 aa17.32■□□□□ 0.36
TPM1-206ENST00000358278 GCFC2P16383 781 aaKnown RBP17.32■□□□□ 0.36
TPM1-206ENST00000358278 ACVR2BQ13705 512 aa17.32■□□□□ 0.36
TPM1-206ENST00000358278 MYSM1Q5VVJ2 828 aa17.32■□□□□ 0.36
TPM1-206ENST00000358278 FBXO46Q6PJ61 603 aaPredicted RBP17.32■□□□□ 0.36
TPM1-206ENST00000358278 MXRA8Q9BRK3 442 aa17.32■□□□□ 0.36
TPM1-206ENST00000358278 WDR81Q562E7 1941 aa17.32■□□□□ 0.36
TPM1-206ENST00000358278 FAM86B1E9PN63 330 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 IGHA2P01877 340 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 INHAP05111 366 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 FAM86B2P0C5J1 330 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 PRKAR2AP13861 404 aaKnown RBP17.31■□□□□ 0.36
TPM1-206ENST00000358278 CIITAP33076 1130 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 SETQ01105 290 aaPredicted RBP17.31■□□□□ 0.36
TPM1-206ENST00000358278 TRIM32Q13049 653 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 MTMR1Q13613 665 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 PRR16Q569H4 304 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 TTC38Q5R3I4 469 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 PRAMEF19Q5SWL8 479 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 MOXD1Q6UVY6 613 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 NLRX1Q86UT6 975 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 CYP2W1Q8TAV3 490 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 SH3TC2Q8TF17 1288 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 INPP4AQ96PE3 977 aaPredicted RBP17.31■□□□□ 0.36
TPM1-206ENST00000358278 DDX25Q9UHL0 483 aaKnown RBP17.31■□□□□ 0.36
TPM1-206ENST00000358278 UBIAD1Q9Y5Z9 338 aa17.31■□□□□ 0.36
TPM1-206ENST00000358278 EDIL3O43854 480 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 ITGB5P18084 799 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 MCM7P33993 719 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CACNB2Q08289 660 aaPredicted RBP17.3■□□□□ 0.36
TPM1-206ENST00000358278 NBR1Q14596 966 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 FOXD4L6Q3SYB3 417 aaPredicted RBP17.3■□□□□ 0.36
TPM1-206ENST00000358278 PPP4R3AQ6IN85 833 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 FOXD4L3Q6VB84 417 aaPredicted RBP17.3■□□□□ 0.36
TPM1-206ENST00000358278 PLA2G4DQ86XP0 818 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 SCFD2Q8WU76 684 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 GPRASP2Q96D09 838 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 WDR11Q9BZH6 1224 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 KATNBL1Q9H079 304 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 JADE2Q9NQC1 790 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CHMP5Q9NZZ3 219 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 NRBP1Q9UHY1 535 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 ZDHHC9Q9Y397 364 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 MRVI1Q9Y6F6 885 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CYP3A7-CYP3A51PA0A087WV96 503 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 FIBPO43427 364 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 RGS20O76081 388 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CYBAP13498 195 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CYP3A7P24462 503 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 CNGA1P29973 690 aa17.3■□□□□ 0.36
TPM1-206ENST00000358278 TOB1P50616 345 aaPredicted RBP17.3■□□□□ 0.36
TPM1-206ENST00000358278 FAM173BQ6P4H8 233 aa17.3■□□□□ 0.36
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms