RNA–Protein interactions for RNA: ENST00000356435.9

PTPRD-202, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

APPRIS P1 TSL 5 BASIC

Gene PTPRD, Length 9,472 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-202ENST00000356435 ACTN1P12814 892 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 THOC5Q13769 683 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 PKP1Q13835 747 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 TAF11Q15544 211 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 GPATCH4Q5T3I0 446 aaKnown RBP6.02□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF577Q9BSK1 485 aa6.02□□□□□ -1.45
PTPRD-202ENST00000356435 RTKN2Q8IZC4 609 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TSPYL6Q8N831 410 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PNMA1Q8ND90 353 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 MCUQ8NE86 351 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 NFE2L3Q9Y4A8 694 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 RECQLP46063 649 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 EPHB1P54762 984 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PHEXP78562 749 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ANKRD42Q8N9B4 389 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 KLHDC4Q8TBB5 520 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF526Q8TF50 670 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PPP1R12CQ9BZL4 782 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 HOMER3Q9NSC5 361 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TET3O43151 1660 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 GPC4O75487 556 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TTLL1O95922 423 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 CRKLP46109 303 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PDE1BQ01064 536 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 CHRNDQ07001 517 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 CC2D2BQ6DHV5 1058 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PDZD8Q8NEN9 1154 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 GPKOWQ92917 476 aaPredicted RBP eCLIP6.01□□□□□ -1.453e-12■■■■■ 70.5
PTPRD-202ENST00000356435 EXOC4Q96A65 974 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 CDK12Q9NYV4 1490 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SMIM24O75264 130 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 CPP00450 1065 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SLFN14P0C7P3 912 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF18P17022 549 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SURF1Q15526 300 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ZNF212Q9UDV6 495 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 LEMD3Q9Y2U8 911 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 HYOU1Q9Y4L1 999 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SNX14Q9Y5W7 946 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 E7EWF7 191 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 A1BGP04217 495 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 GNAT1P11488 350 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 HOXD10P28358 340 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TECP42680 631 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 FBXW4P57775 412 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ANKRD20A4Q4UJ75 823 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ANKRD20A8PQ5CZ79 823 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ANKRD20A2Q5SQ80 823 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ANKRD20A1Q5TYW2 823 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 USPL1Q5W0Q7 1092 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 URGCPQ8TCY9 931 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 RNF139Q8WU17 664 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SPDL1Q96EA4 605 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TACO1Q9BSH4 297 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 KMT5AQ9NQR1 393 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 CPSF2Q9P2I0 782 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 FNDC3AQ9Y2H6 1198 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 KLRF2D3W0D1 207 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 INO80B-WBP1J3KQ70 363 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SETSIPP0DME0 302 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PDCD2Q16342 344 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 WHAMMP3Q1A5X7 153 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 MGARPQ8TDB4 240 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ZC3H15Q8WU90 426 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 DHX38Q92620 1227 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 INO80BQ9C086 356 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 DHX36Q9H2U1 1008 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TRIM45Q9H8W5 580 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 OLA1Q9NTK5 396 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 PCDHA12Q9UN75 941 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 RIPOR2Q9Y4F9 1068 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 BZW2Q9Y6E2 419 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 NEURL1BA8MQ27 555 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SGSM2O43147 1006 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 SART1O43290 800 aaKnown RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ATP5JP18859 108 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TBCCQ15814 346 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ACBD5Q5T8D3 534 aaPredicted RBP6.01□□□□□ -1.45
PTPRD-202ENST00000356435 KRT27Q7Z3Y8 459 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 RPAINQ86UA6 219 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 TRIM42Q8IWZ5 723 aa6.01□□□□□ -1.45
PTPRD-202ENST00000356435 ADGRL3Q9HAR2 1447 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 GTPBP6O43824 516 aaPredicted RBP6□□□□□ -1.45
PTPRD-202ENST00000356435 PCCAP05165 728 aaPredicted RBP6□□□□□ -1.45
PTPRD-202ENST00000356435 INPP5BP32019 993 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 GYG1P46976 350 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 ADAM9Q13443 819 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 RAPH1Q70E73 1250 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 SIRT2Q8IXJ6 389 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 PHACTR3Q96KR7 559 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 ORAI2Q96SN7 254 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 SLF1Q9BQI6 1058 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 CUEDC2Q9H467 287 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 L2HGDHQ9H9P8 463 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 FRMD4AQ9P2Q2 1039 aaPredicted RBP6□□□□□ -1.45
PTPRD-202ENST00000356435 TEKT2Q9UIF3 430 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 MCF2LO15068 1137 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 PNOCQ13519 176 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 WDR11Q9BZH6 1224 aa6□□□□□ -1.45
PTPRD-202ENST00000356435 USP17L12C9JPN9 530 aa6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms