RNA–Protein interactions for RNA: ENST00000356316.7

CAPN3-204, Transcript of calpain 3, humanhuman

TSL 5 BASIC

Gene CAPN3, Length 1,291 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-204ENST00000356316 PTGISQ16647 500 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 CCDC62Q6P9F0 684 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 KCNV1Q6PIU1 500 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 CYB5R4Q7L1T6 521 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 STAG2Q8N3U4 1231 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 SAMD3Q8N6K7 520 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 CCDC155Q8N6L0 562 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 NCOA7Q8NI08 942 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 AFG1LQ8WV93 481 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 FTOQ9C0B1 505 aaKnown RBP eCLIP12.38□□□□□ -0.43
CAPN3-204ENST00000356316 PXMP2Q9NR77 195 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 CXXC1Q9P0U4 656 aaPredicted RBP12.38□□□□□ -0.43
CAPN3-204ENST00000356316 MRVI1Q9Y6F6 885 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 KIAA1217Q5T5P2 1943 aa12.38□□□□□ -0.43
CAPN3-204ENST00000356316 PALM3A6NDB9 673 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-204ENST00000356316 ARIH2O95376 493 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 CYP21A2P08686 494 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 MYCLP12524 364 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-204ENST00000356316 GSPT1P15170 499 aaKnown RBP12.37□□□□□ -0.43
CAPN3-204ENST00000356316 DGKDQ16760 1214 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 CATIPQ7Z7H3 387 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 HOMER1Q86YM7 354 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 DHX37Q8IY37 1157 aaKnown RBP12.37□□□□□ -0.43
CAPN3-204ENST00000356316 C7orf31Q8N865 590 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 PPM1EQ8WY54 764 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 COL25A1Q9BXS0 654 aaPredicted RBP12.37□□□□□ -0.43
CAPN3-204ENST00000356316 PRDM12Q9H4Q4 367 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 COL20A1Q9P218 1284 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 MAD2L2Q9UI95 211 aa12.37□□□□□ -0.43
CAPN3-204ENST00000356316 DDX41Q9UJV9 622 aaKnown RBP12.37□□□□□ -0.43
CAPN3-204ENST00000356316 E7EWF7 191 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 GCOM1H8Y6P7 765 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-204ENST00000356316 MMP3P08254 477 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 IQCF3P0C7M6 154 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 POLR2MP0CAP2 368 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 ATP2A2P16615 1042 aaKnown RBP12.36□□□□□ -0.43
CAPN3-204ENST00000356316 IGFBP4P22692 258 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 HSD17B4P51659 736 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 IRX6P78412 446 aaPredicted RBP12.36□□□□□ -0.43
CAPN3-204ENST00000356316 PTH1RQ03431 593 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 ARHGAP1Q07960 439 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 PPP1R13LQ8WUF5 828 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 SYMPKQ92797 1274 aaKnown RBP12.36□□□□□ -0.43
CAPN3-204ENST00000356316 KATNAL1Q9BW62 490 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 IL25Q9H293 177 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 NKX2-4Q9H2Z4 354 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 PCDHA11Q9Y5I1 949 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 MYH7BA7E2Y1 1941 aa12.36□□□□□ -0.43
CAPN3-204ENST00000356316 CHD9Q3L8U1 2897 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 PNMA6FA0A0J9YX94 578 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 KIF28PB7ZC32 967 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 HOXA13P31271 388 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-204ENST00000356316 RABGGTBP53611 331 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 GRM4Q14833 912 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 TMEM67Q5HYA8 995 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 PPP2R2DQ66LE6 453 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 STOX1Q6ZVD7 989 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 FCHSD1Q86WN1 690 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 EMID1Q96A84 441 aaPredicted RBP12.35□□□□□ -0.43
CAPN3-204ENST00000356316 MTMR8Q96EF0 704 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 PIGSQ96S52 555 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 GBF1Q92538 1859 aa12.35□□□□□ -0.43
CAPN3-204ENST00000356316 SCN10AQ9Y5Y9 1956 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 SGSM2O43147 1006 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 PPFIA4O75335 1185 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 PARNO95453 639 aaKnown RBP12.34□□□□□ -0.43
CAPN3-204ENST00000356316 TGFB3P10600 412 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 CCND2P30279 289 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 CASC1Q6TDU7 716 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 VSIG10LQ86VR7 867 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 SESTD1Q86VW0 696 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 PPTC7Q8NI37 304 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 CTCFLQ8NI51 663 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-204ENST00000356316 CAGE1Q8TC20 777 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 PHOSPHO2Q8TCD6 241 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 AFAP1L1Q8TED9 768 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 MAP4K1Q92918 833 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 SPATA33Q96N06 139 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 PDCD2LQ9BRP1 358 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 ALG1Q9BT22 464 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 TSPYL2Q9H2G4 693 aaPredicted RBP12.34□□□□□ -0.43
CAPN3-204ENST00000356316 RIOX1Q9H6W3 641 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 MLXIPQ9HAP2 919 aa12.34□□□□□ -0.43
CAPN3-204ENST00000356316 HAX1O00165 279 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 PPP1R11O60927 126 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-204ENST00000356316 KIF5BP33176 963 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 KCNJ6P48051 423 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 PSEN2P49810 448 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 GHRHRQ02643 423 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 MFSD10Q14728 455 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 PGM5Q15124 567 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 CCDC85BQ15834 202 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-204ENST00000356316 KIAA0753Q2KHM9 967 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 GNPTABQ3T906 1256 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 CELF3Q5SZQ8 465 aaKnown RBP12.33□□□□□ -0.44
CAPN3-204ENST00000356316 GDF6Q6KF10 455 aaPredicted RBP12.33□□□□□ -0.44
CAPN3-204ENST00000356316 NFXL1Q6ZNB6 911 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 TMTC2Q8N394 836 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 PIBF1Q8WXW3 757 aa12.33□□□□□ -0.44
CAPN3-204ENST00000356316 CUL5Q93034 780 aa12.33□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms