RNA–Protein interactions for RNA: ENST00000354848.5

CD46-203, Transcript of CD46 molecule, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene CD46, Length 3,233 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD46-203ENST00000354848 NOX5Q96PH1 765 aa8.65□□□□□ -1.02
CD46-203ENST00000354848 ZNF317Q96PQ6 595 aaPredicted RBP8.65□□□□□ -1.02
CD46-203ENST00000354848 TMEM94Q12767 1356 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 GRID2IPA4D2P6 1211 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 CTNND1O60716 968 aaKnown RBP8.65□□□□□ -1.03
CD46-203ENST00000354848 KIF4AO95239 1232 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 BMP15O95972 392 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 CTCFP49711 727 aaPredicted RBP8.65□□□□□ -1.03
CD46-203ENST00000354848 ALDH5A1P51649 535 aaPredicted RBP8.65□□□□□ -1.03
CD46-203ENST00000354848 PTGDRQ13258 359 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 SLC39A6Q13433 755 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 ITIH4Q14624 930 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 GNPTABQ3T906 1256 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 ANKRD20A2Q5SQ80 823 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 ANKRD20A1Q5TYW2 823 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 ANKRD20A3Q5VUR7 823 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 LRP10Q7Z4F1 713 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 ERICH1Q86X53 443 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 UBLCP1Q8WVY7 318 aaPredicted RBP8.65□□□□□ -1.03
CD46-203ENST00000354848 IP6K1Q92551 441 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 TSC22D3Q99576 134 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 OSBPL1AQ9BXW6 950 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 PUS3Q9BZE2 481 aaKnown RBP8.65□□□□□ -1.03
CD46-203ENST00000354848 FAM129AQ9BZQ8 928 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 FBXL5Q9UKA1 691 aa8.65□□□□□ -1.03
CD46-203ENST00000354848 PKD1L3Q7Z443 1732 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 AFF2P51816 1311 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 EIF4E1BA6NMX2 242 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 LUC7L3O95232 432 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 NPM1P06748 294 aaKnown RBP eCLIP8.64□□□□□ -1.03
CD46-203ENST00000354848 GNAT1P11488 350 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 ROR2Q01974 943 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 RASSF7Q02833 373 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 MAP3K12Q12852 859 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 TCIRG1Q13488 830 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 AMOTQ4VCS5 1084 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 TTI2Q6NXR4 508 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 TRPM8Q7Z2W7 1104 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 PIGWQ7Z7B1 504 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 KLHL7Q8IXQ5 586 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 EIF1ADQ8N9N8 165 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 CENPTQ96BT3 561 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 ERGIC2Q96RQ1 377 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 PSMD1Q99460 953 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 NEUROG2Q9H2A3 272 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 ARHGAP23Q9P227 1491 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 ASAP2O43150 1006 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 ATP2C1P98194 919 aaPredicted RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 MIIPQ5JXC2 388 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 DDX42Q86XP3 938 aaKnown RBP eCLIP8.64□□□□□ -1.031e-9■■■□□ 17.6
CD46-203ENST00000354848 GPIHBP1Q8IV16 184 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 RNF10Q8N5U6 811 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 INPP4AQ96PE3 977 aaPredicted RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 DUSP9Q99956 384 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 CNOT10Q9H9A5 744 aaKnown RBP8.64□□□□□ -1.03
CD46-203ENST00000354848 LRRC4CQ9HCJ2 640 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 MYH4Q9Y623 1939 aa8.64□□□□□ -1.03
CD46-203ENST00000354848 ADAMTS13Q76LX8 1427 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 DPPA5A6NC42 116 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 A8MUI8 341 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 STXBP3O00186 592 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 PSMA7O14818 248 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 NKRFO15226 690 aaKnown RBP eCLIP8.63□□□□□ -1.03
CD46-203ENST00000354848 EVI5O60447 810 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 SMIM24O75264 130 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 KRT2P35908 639 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 FLT3P36888 993 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 TNNC1P63316 161 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 CUL1Q13616 776 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 CSGALNACT2Q8N6G5 542 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 NOC4LQ9BVI4 516 aaKnown RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 ARHGEF10LQ9HCE6 1279 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 ABCC12Q96J65 1359 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 AKAP11Q9UKA4 1901 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 EPHB6O15197 1021 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 PALMO75781 387 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 FTCDO95954 541 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 PYGLP06737 847 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 MYBL1P10243 752 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 ATP2A2P16615 1042 aaKnown RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 CCNG1P51959 295 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 NCALDP61601 193 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 GFPT1Q06210 699 aaPredicted RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 LAMB3Q13751 1172 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 KRT71Q3SY84 523 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 TTC38Q5R3I4 469 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 ZNF790Q6PG37 636 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 RPUSD2Q8IZ73 545 aaKnown RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 USP38Q8NB14 1042 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 CNOT6LQ96LI5 555 aaKnown RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 PYM1Q9BRP8 204 aaKnown RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 ZKSCAN3Q9BRR0 538 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 ABCF3Q9NUQ8 709 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 TMEM59LQ9UK28 342 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 PACSIN2Q9UNF0 486 aaPredicted RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 TACC3Q9Y6A5 838 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 SLIT3O75094 1523 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 SPDYE3A6NKU9 549 aa8.63□□□□□ -1.03
CD46-203ENST00000354848 SART1O43290 800 aaKnown RBP8.63□□□□□ -1.03
CD46-203ENST00000354848 RARAP10276 462 aa8.63□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.9 ms